| Protein: | TUB3 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 445 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TUB3.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..444] | [1..443] |
|
|
0.0 | [1..444] | [1..443] |
|
|
0.0 | [1..444] | [1..443] |
|
|
0.0 | [1..441] | [1..440] |
|
|
0.0 | [1..441] | [1..440] |
|
|
0.0 | [1..444] | [1..443] |
|
|
0.0 | [1..441] | [1..440] |
|
Region A: Residues: [1-445] |
1 11 21 31 41 51
| | | | | |
1 MREVISINVG QAGCQIGNAC WELYSLEHGI KEDGHLEDGL SKPKGGEEGF STFFHETGYG 60
61 KFVPRAIYVD LEPNVIDEVR TGRFKELFHP EQLINGKEDA ANNYARGHYT VGREIVDEVE 120
121 ERIRKMADQC DGLQGFLFTH SLGGGTGSGL GSLLLENLSY EYGKKSKLEF AVYPAPQLST 180
181 SVVEPYNTVL TTHTTLEHAD CTFMVDNEAI YDICKRNLGI SRPSFSNLNG LIAQVISSVT 240
241 ASLRFDGSLN VDLNEFQTNL VPYPRIHFPL VSYAPILSKK RATHESNSVS EITNACFEPG 300
301 NQMVKCDPTK GKYMANCLLY RGDVVTRDVQ RAVEQVKNKK TVQMVDWCPT GFKIGICYEP 360
361 PSVIPSSELA NVDRAVCMLS NTTAIADAWK RIDQKFDLMY AKRAFVHWYV GEGMEEGEFT 420
421 EAREDLAALE RDYIEVGADS YAEEF
|
| Detection Method: |  |
| Confidence: | 11000.0 |
| Match: | 1ffxA_ |
| Description: | Tubulin:stathmin-like domain complex |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| structural constituent of cytoskeleton | 4.89410373995712 | bayes_pls_golite062009 |
| structural molecule activity | 4.16877499797638 | bayes_pls_golite062009 |
| tubulin binding | 2.4432045213385 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 2.24606230377981 | bayes_pls_golite062009 |
| binding | 1.95582292281451 | bayes_pls_golite062009 |
| GTPase activity | 1.87512665946067 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 1.77500173070686 | bayes_pls_golite062009 |
| pyrophosphatase activity | 1.7017047947554 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 1.68267378160702 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 1.68038087466376 | bayes_pls_golite062009 |
| protein binding | 1.60795853516357 | bayes_pls_golite062009 |
| MHC class I protein binding | 1.46574865275013 | bayes_pls_golite062009 |
| gamma-tubulin binding | 1.02742779831447 | bayes_pls_golite062009 |
| hydrolase activity | 0.502038132260603 | bayes_pls_golite062009 |
| GTP binding | 0.497195442717678 | bayes_pls_golite062009 |
| guanyl ribonucleotide binding | 0.47649264826419 | bayes_pls_golite062009 |
| guanyl nucleotide binding | 0.468397101803116 | bayes_pls_golite062009 |
| receptor binding | 0.00945891657658993 | bayes_pls_golite062009 |
