| Protein: | UBX2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 584 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for UBX2.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..571] | [1..571] |
|
|
2.0E-99 | [21..505] | [11..492] |
|
|
6.0E-95 | [14..511] | [7..468] |
|
|
3.0E-94 | [13..527] | [6..463] |
|
|
1.0E-90 | [19..523] | [6..463] |
|
Region A: Residues: [1-95] |
1 11 21 31 41 51
| | | | | |
1 MPVVNHEDSE FHLSHTEEDK LNEFQVITNF PPEDLPDVVR LLRNHGWQLE PALSRYFDGE 60
61 WKGEPDQMGE PTQTSTPMAE TLVPPALGPR PLLFT
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [96-182] |
1 11 21 31 41 51
| | | | | |
1 ASLPVVRPLP ANFRNDFRTI GLNGRSNTVW SMFESFSYDG NPFLFILLLI PRIINRLSAT 60
61 IFTFFCTLLS LHSISGGGNS GKPKISK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [183-351] |
1 11 21 31 41 51
| | | | | |
1 VPKAPTRETH IPLAEILGDT KDKDAFCELK SFKPDISFNE ALRIAKEEFK FMLLILVGDT 60
61 YDTDTDTVDV NSKLLLEKIL LNKKTLQYLR KIDNDLIIYL KCVHELEPWL VARQLGVRNT 120
121 PEIFLIANVA NKASHSETLP SQRLSILGKL KVNSLNRFLQ SLTNVVEKY
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
| Term | Confidence | Notes |
| protein disulfide isomerase activity | 2.05206748531532 | bayes_pls_golite062009 |
| intramolecular oxidoreductase activity, transposing S-S bonds | 2.05206748531532 | bayes_pls_golite062009 |
| intramolecular oxidoreductase activity, interconverting keto- and enol-groups | 1.83987272812734 | bayes_pls_golite062009 |
| intramolecular oxidoreductase activity | 1.5535855642475 | bayes_pls_golite062009 |
| catalytic activity | 0.672192331361968 | bayes_pls_golite062009 |
| protein binding | 0.532751276111804 | bayes_pls_golite062009 |
| hydrolase activity | 0.517269321619613 | bayes_pls_golite062009 |
| binding | 0.235855919597681 | bayes_pls_golite062009 |
| peptidase activity, acting on L-amino acid peptides | 0.0866917827040035 | bayes_pls_golite062009 |
|
Region A: Residues: [352-426] |
1 11 21 31 41 51
| | | | | |
1 TPELVVNKTE MHELRMSREI KKLQEDAYKK SLEMDRIKAI EKEKSLKHAQ DLKLNSTARQ 60
61 LKWLKACIDE IQPFE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
| Term | Confidence | Notes |
| small conjugating protein ligase activity | 6.3238498800949 | bayes_pls_golite062009 |
| ubiquitin-protein ligase activity | 5.759996473289 | bayes_pls_golite062009 |
| acid-amino acid ligase activity | 5.32190918602578 | bayes_pls_golite062009 |
| ligase activity, forming carbon-nitrogen bonds | 4.23828791893907 | bayes_pls_golite062009 |
| protein binding | 2.26682390101852 | bayes_pls_golite062009 |
| ligase activity | 2.25858205355159 | bayes_pls_golite062009 |
| binding | 1.76448263865625 | bayes_pls_golite062009 |
| hydrolase activity | 0.614233748923048 | bayes_pls_golite062009 |
|
Region A: Residues: [427-518] |
1 11 21 31 41 51
| | | | | |
1 TTGKQATLQF RTSSGKRFVK KFPSMTTLYQ IYQSIGCHIY LAVYSSDPAE WSNALQDKIR 60
61 QLSADDDMLC FKEGQLETAT ATTIEELGHI IN
|
| Detection Method: | |
| Confidence: | 13.154902 |
| Match: | 1h8cA_ |
| Description: | Fas-assosiated factor 1, Faf1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [519-584] |
1 11 21 31 41 51
| | | | | |
1 NELTSFDLER GKLEFDFELV SPFPKYTVHP NEHMSVDQVP QLWPNGSLLV EALDEEDEED 60
61 EENEEQ
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
