| Protein: | STU2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 888 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for STU2.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..888] | [1..888] |
|
|
0.0 | [1..883] | [1..826] |
|
|
0.0 | [3..737] | [7..676] |
|
|
0.0 | [3..737] | [1..670] |
|
|
0.0 | [3..737] | [1..670] |
|
|
0.0 | [1..882] | [1..803] |
|
|
0.0 | [3..737] | [1..667] |
|
Region A: Residues: [1-155] |
1 11 21 31 41 51
| | | | | |
1 MSGEEEVDYT TLPLEERLTY KLWKARLEAY KELNQLFRNS VGDISRDDNI QIYWRDPTLF 60
61 AQYITDSNVV AQEQAIVALN SLIDAFASSS LKNAHNITLI STWTPLLVEK GLTSSRATTK 120
121 TQSMSCILSL CGLDTSITQS VELVIPFFEK KLPKL
|
| Detection Method: |  |
| Confidence: | 62.69897 |
| Match: | 1b3uA_ |
| Description: | Constant regulatory domain of protein phosphatase 2a, pr65alpha |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| protein transporter activity | 3.05338750264476 | bayes_pls_golite062009 |
| binding | 2.86831493830281 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 2.61566088685247 | bayes_pls_golite062009 |
| actin binding | 1.76244772281676 | bayes_pls_golite062009 |
| protein binding | 1.63705839411934 | bayes_pls_golite062009 |
| transporter activity | 1.55621630624352 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 1.33334123659384 | bayes_pls_golite062009 |
| protein transmembrane transporter activity | 1.15447282085461 | bayes_pls_golite062009 |
| nucleic acid binding | 0.804909841250605 | bayes_pls_golite062009 |
| transmembrane transporter activity | 0.350388174853674 | bayes_pls_golite062009 |
| signal sequence binding | 0.27824906981293 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.141331164449492 | bayes_pls_golite062009 |
| transcription regulator activity | 0.123389318446902 | bayes_pls_golite062009 |
| DNA binding | 0.089209424262799 | bayes_pls_golite062009 |
| RNA binding | 0.0370585094254798 | bayes_pls_golite062009 |
|
Region A: Residues: [156-330] |
1 11 21 31 41 51
| | | | | |
1 IAAAANCVYE LMAAFGLTNV NVQTFLPELL KHVPQLAGHG DRNVRSQTMN LIVEIYKVTG 60
61 NNSDLLEEIL FKKLKPIQVK DLHKLFAKVG DEPSSSKMLF EWEKRELEKK RSQEEEARKR 120
121 KSILSNDEGE YQIDKDGDTL MGMETDMPPS KQQSGVQIDT FSMLPEETIL DKLPK
|
| Detection Method: | |
| Confidence: | 62.69897 |
| Match: | 1b3uA_ |
| Description: | Constant regulatory domain of protein phosphatase 2a, pr65alpha |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [331-561] |
1 11 21 31 41 51
| | | | | |
1 DFQERITSSK WKDRVEALEE FWDSVLSQTK KLKSTSQNYS NLLGIYGHII QKDANIQAVA 60
61 LAAQSVELIC DKLKTPGFSK DYVSLVFTPL LDRTKEKKPS VIEAIRKALL TICKYYDPLA 120
121 SSGRNEDMLK DILEHMKHKT PQIRMECTQL FNASMKEEKD GYSTLQRYLK DEVVPIVIQI 180
181 VNDTQPAIRT IGFESFAILI KIFGMNTFVK TLEHLDNLKR KKIEETVKTL P
|
| Detection Method: | |
| Confidence: | 62.69897 |
| Match: | 1b3uA_ |
| Description: | Constant regulatory domain of protein phosphatase 2a, pr65alpha |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [562-755] |
1 11 21 31 41 51
| | | | | |
1 NFSIASGSTH STIETNKQTG PMENKFLLKK SSVLPSKRVA SSPLRNDNKS KVNPIGSVAS 60
61 ASKPSMVAAN NKSRVLLTSK SLATPKNVVA NSTDKNEKLI EEYKYRLQKL QNDEMIWTKE 120
121 RQSLLEKMNN TENYKIEMIK ENEMLREQLK EAQSKLNEKN IQLRSKEIDV NKLSDRVLSL 180
181 ENELRNMEIE LDRN
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [756-888] |
1 11 21 31 41 51
| | | | | |
1 KKRNDTNLQS MGTISSYSIP SSTVSSNYGV KSLSSALPFK EEEDVRRKED VNYERRSSES 60
61 IGDLPHRVNS LNIRPYRKNG TGVSSVSDDL DIDFNDSFAS EESYKRAAAV TSTLKARIEK 120
121 MKAKSRREGT TRT
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
