| Protein: | DGR2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 852 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DGR2.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [174..826] | [865..1486] |
|
|
0.0 | [59..750] | [1026..1677] |
|
|
0.0 | [81..662] | [823..1364] |
|
|
0.0 | [1..852] | [1..852] |
|
Region A: Residues: [1-107] |
1 11 21 31 41 51
| | | | | |
1 MFKSKTSTLS YDETPNSNEG DRNATPVNPK EKSQTKHLNI PGDRSRHSSI ADSKRSSSRY 60
61 DGGYSADIIP AQLRFIDNID YGTRLRKTLH RNSVVSNGYN KLSENDR
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [108-274] |
1 11 21 31 41 51
| | | | | |
1 WYFDLFDRKY FENYLEEPTY IKIFKKKEGL EQFDRMFLAQ ELKIPDVYKS TTYQGEPAVA 60
61 NSELFKNSIC CCTFSHDGKY MVIGCKDGSL HLWKVINSPV KRSEMGRSEK SVSASRANSL 120
121 KIQRHLASIS SHNGSISSND LKPSDQFEGP SKQLHLYAPV FYSDVFR
|
| Detection Method: | |
| Confidence: | 126.28043 |
| Match: | 1erjA_ |
| Description: | Tup1, C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [275-611] |
1 11 21 31 41 51
| | | | | |
1 VFMEHALDIL DANWSKNGFL ITASMDKTAK LWHPERKYSL KTFVHPDFVT SAIFFPNDDR 60
61 FIITGCLDHR CRLWSILDNE VSYAFDCKDL ITSLTLSPPG GEYTIIGTFN GYIYVLLTHG 120
121 LKFVSSFHVS DKSTQGTTKN SFHPSSEYGK VQHGPRITGL QCFFSKVDKN LRLIVTTNDS 180
181 KIQIFDLNEK KPLELFKGFQ SGSSRHRGQF LMMKNEPVVF TGSDDHWFYT WKMQSFNLSA 240
241 EMNCTAPHRK KRLSGSMSLK GLLRIVSNKS TNDECLTETS NQSSSHTFTN SSKNVLQTQT 300
301 VGSQAIKNNH YISFHAHNSP VTCASIAPDV AIKNLSL
|
| Detection Method: | |
| Confidence: | 34.221849 |
| Match: | 1scgB_ |
| Description: | No description for 1scgB_ was found. |
|
Region A: Residues: [612-852] |
1 11 21 31 41 51
| | | | | |
1 SNDLIFELTS QYFKEMGQNY SESKETCDNK PNHPVTETGG FSSNLSNVVN NVGTILITTD 60
61 SQGLIRVFRT DILPEIRKKI IEKFHEYNLF HLEAAGKINN HNNDSILENR MDERSSTEDN 120
121 EFSTTPPSNT HNSRPSHDFC ELHPNNSPVI SGMPSRASAI FKNSIFNKSN GSFISLKSRS 180
181 ESTSSTVFGP HDIPRVSTTY PKLKCDVCNG SNFECASKNP IAGGDSGFTC ADCGTILNNF 240
241 R
|
| Detection Method: | |
| Confidence: | 2.69897 |
| Match: | 1c5kA_ |
| Description: | TolB, C-terminal domain; TolB, N-terminal domain |
Matching Structure (courtesy of the PDB): |
|
