Protein: | SSC1 |
Organism: | Saccharomyces cerevisiae |
Length: | 654 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SSC1.
Description | E-value | Query Range |
Subject Range |
|
0.0 | [29..632] | [1..610] |
|
0.0 | [26..633] | [3..618] |
|
0.0 | [26..634] | [2..617] |
|
0.0 | [26..644] | [2..625] |
|
0.0 | [29..636] | [1..602] |
|
0.0 | [32..633] | [6..615] |
|
0.0 | [29..653] | [1..627] |
|
0.0 | [32..634] | [6..615] |
|
0.0 | [29..634] | [3..613] |
Region A: Residues: [1-198] |
1 11 21 31 41 51 | | | | | | 1 MLAAKNILNR SSLSSSFRIA TRLQSTKVQG SVIGIDLGTT NSAVAIMEGK VPKIIENAEG 60 61 SRTTPSVVAF TKEGERLVGI PAKRQAVVNP ENTLFATKRL IGRRFEDAEV QRDIKQVPYK 120 121 IVKHSNGDAW VEARGQTYSP AQIGGFVLNK MKETAEAYLG KPVKNAVVTV PAYFNDSQRQ 180 181 ATKDAGQIVG LNVLRVVN |
Region B: Residues: [394-408] |
1 11 21 31 41 51 | | | | | | 1 VAIGAAVQGA VLSGE |
Detection Method: | ![]() |
Confidence: | 2370.0 |
Match: | 1dkgD_ |
Description: | Heat shock protein 70kDa, ATPase fragment |
Matching Structure (courtesy of the PDB):![]() |
Term | Confidence | Notes |
unfolded protein binding | 7.97191512372019 | bayes_pls_golite062009 |
structural molecule activity | 3.59589495899762 | bayes_pls_golite062009 |
structural constituent of cytoskeleton | 2.46121037473545 | bayes_pls_golite062009 |
carbohydrate kinase activity | 2.33338276303563 | bayes_pls_golite062009 |
cytoskeletal protein binding | 2.20983242331685 | bayes_pls_golite062009 |
binding | 2.11855816699924 | bayes_pls_golite062009 |
protein binding | 2.00711904074672 | bayes_pls_golite062009 |
hydrolase activity | 1.88613511243568 | bayes_pls_golite062009 |
hexokinase activity | 1.70516840340504 | bayes_pls_golite062009 |
transcription regulator activity | 1.68670098354938 | bayes_pls_golite062009 |
nucleic acid binding | 1.43834016708999 | bayes_pls_golite062009 |
peptidase activity | 1.4127499531612 | bayes_pls_golite062009 |
DNA binding | 1.36804228074586 | bayes_pls_golite062009 |
transporter activity | 1.2883466875237 | bayes_pls_golite062009 |
phosphotransferase activity, alcohol group as acceptor | 1.16749728168925 | bayes_pls_golite062009 |
kinase activity | 1.11102445353265 | bayes_pls_golite062009 |
actin binding | 1.03829083423378 | bayes_pls_golite062009 |
transferase activity, transferring phosphorus-containing groups | 0.953663805249074 | bayes_pls_golite062009 |
hydrolase activity, acting on acid anhydrides | 0.900931843471417 | bayes_pls_golite062009 |
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 0.898645342556399 | bayes_pls_golite062009 |
pyrophosphatase activity | 0.875671218597808 | bayes_pls_golite062009 |
substrate-specific transporter activity | 0.796517590178929 | bayes_pls_golite062009 |
transcription factor activity | 0.783439770973386 | bayes_pls_golite062009 |
nucleoside-triphosphatase activity | 0.78242344952806 | bayes_pls_golite062009 |
protein transporter activity | 0.780308299678282 | bayes_pls_golite062009 |
ATPase activity | 0.687771333492666 | bayes_pls_golite062009 |
myosin binding | 0.607451856096 | bayes_pls_golite062009 |
glucose binding | 0.53527958884988 | bayes_pls_golite062009 |
glucokinase activity | 0.47468456642723 | bayes_pls_golite062009 |
catalytic activity | 0.296484721581333 | bayes_pls_golite062009 |
general RNA polymerase II transcription factor activity | 0.186218331473028 | bayes_pls_golite062009 |
chromatin binding | 0.155140608043269 | bayes_pls_golite062009 |
protease binding | 0.121259015422625 | bayes_pls_golite062009 |
chaperone binding | 0.00111313452804307 | bayes_pls_golite062009 |
Region A: Residues: [199-254] |
1 11 21 31 41 51 | | | | | | 1 EPTAAALAYG LEKSDSKVVA VFDLGGGTFD ISILDIDNGV FEVKSTNGDT HLGGED |
Region B: Residues: [332-393] |
1 11 21 31 41 51 | | | | | | 1 TAPLVKRTVD PVKKALKDAG LSTSDISEVL LVGGMSRMPK VVETVKSLFG KDPSKAVNPD 60 61 EA |
Detection Method: | ![]() |
Confidence: | 2370.0 |
Match: | 1dkgD_ |
Description: | Heat shock protein 70kDa, ATPase fragment |
Matching Structure (courtesy of the PDB):![]() |
Region A: Residues: [255-331] |
1 11 21 31 41 51 | | | | | | 1 FDIYLLREIV SRFKTETGID LENDRMAIQR IREAAEKAKI ELSSTVSTEI NLPFITADAS 60 61 GPKHINMKFS RAQFETL |
Detection Method: | ![]() |
Confidence: | 2370.0 |
Match: | 1dkgD_ |
Description: | Heat shock protein 70kDa, ATPase fragment |
Matching Structure (courtesy of the PDB):![]() |
Region A: Residues: [409-554] |
1 11 21 31 41 51 | | | | | | 1 VTDVLLLDVT PLSLGIETLG GVFTRLIPRN TTIPTKKSQI FSTAAAGQTS VEIRVFQGER 60 61 ELVRDNKLIG NFTLAGIPPA PKGVPQIEVT FDIDADGIIN VSARDKATNK DSSITVAGSS 120 121 GLSENEIEQM VNDAEKFKSQ DEARKQ |
Detection Method: | ![]() |
Confidence: | 561.533179 |
Match: | 1dkyA_ |
Description: | DnaK |
Matching Structure (courtesy of the PDB):![]() |
Region A: Residues: [555-654] |
1 11 21 31 41 51 | | | | | | 1 AIETANKADQ LANDTENSLK EFEGKVDKAE AQKVRDQITS LKELVARVQG GEEVNAEELK 60 61 TKTEELQTSS MKLFEQLYKN DSNNNNNNNG NNAESGETKQ |
Detection Method: | ![]() |
Confidence: | 561.533179 |
Match: | 1dkyA_ |
Description: | DnaK |
Matching Structure (courtesy of the PDB):![]() |