| Protein: | RFA3 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 122 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RFA3.
| Description | E-value | Query Range |
Subject Range |
|
|
8.0E-69 | [1..122] | [1..122] |
|
Region A: Residues: [1-122] |
1 11 21 31 41 51
| | | | | |
1 MASETPRVDP TEISNVNAPV FRIIAQIKSQ PTESQLILQS PTISSKNGSE VEMITLNNIR 60
61 VSMNKTFEID SWYEFVCRNN DDGELGFLIL DAVLCKFKEN EDLSLNGVVA LQRLCKKYPE 120
121 IY
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
| Term | Confidence | Notes |
| telomeric DNA binding | 6.80354805962079 | bayes_pls_golite062009 |
| single-stranded telomeric DNA binding | 5.68297908219419 | bayes_pls_golite062009 |
| telomerase inhibitor activity | 5.1433503909639 | bayes_pls_golite062009 |
| structure-specific DNA binding | 3.21942642139833 | bayes_pls_golite062009 |
| single-stranded DNA binding | 3.2177041772475 | bayes_pls_golite062009 |
| nucleic acid binding | 3.06958664528424 | bayes_pls_golite062009 |
| binding | 2.55343783977289 | bayes_pls_golite062009 |
| DNA binding | 2.39520356118846 | bayes_pls_golite062009 |
| structural constituent of ribosome | 2.05553707774342 | bayes_pls_golite062009 |
| structural molecule activity | 1.91392288234828 | bayes_pls_golite062009 |
| DNA helicase activity | 1.03434608237928 | bayes_pls_golite062009 |
| transcription regulator activity | 0.786603442061911 | bayes_pls_golite062009 |
| DNA-dependent ATPase activity | 0.633347054314125 | bayes_pls_golite062009 |
| translation regulator activity | 0.370723767971907 | bayes_pls_golite062009 |
| nuclease activity | 0.344602655860014 | bayes_pls_golite062009 |
| ribonuclease activity | 0.327087435405429 | bayes_pls_golite062009 |
| double-stranded DNA binding | 0.326586310136168 | bayes_pls_golite062009 |
| translation factor activity, nucleic acid binding | 0.322367891458082 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 0.285831998808043 | bayes_pls_golite062009 |
| DEAD/H-box RNA helicase binding | 0.234313553803999 | bayes_pls_golite062009 |
| four-way junction helicase activity | 0.149878585899218 | bayes_pls_golite062009 |
| exonuclease activity | 0.123437412322173 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.112654475341878 | bayes_pls_golite062009 |
| protein binding | 0.0856707433885143 | bayes_pls_golite062009 |
| transcription factor activity | 0.0739391344707232 | bayes_pls_golite062009 |
| translation initiation factor activity | 0.0214826254708589 | bayes_pls_golite062009 |
