| Protein: | MET18 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1032 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MET18.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [23..1027] | [28..1027] |
|
|
0.0 | [1..1032] | [1..1032] |
|
|
0.0 | [23..1027] | [27..1026] |
|
|
0.0 | [7..1024] | [3..1017] |
|
Region A: Residues: [1-207] |
1 11 21 31 41 51
| | | | | |
1 MTPDELNSAV VTFMANLNID DSKANETAST VTDSIVHRSI KLLEVVVALK DYFLSENEVE 60
61 RKKALTCLTT ILAKTPKDHL SKNECSVIFQ FYQSKLDDQA LAKEVLEGFA ALAPMKYVSI 120
121 NEIAQLLRLL LDNYQQGQHL ASTRLWPFKI LRKIFDRFFV NGSSTEQVKR INDLFIETFL 180
181 HVANGEKDPR NLLLSFALNK SITSSLQ
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [208-458] |
1 11 21 31 41 51
| | | | | |
1 NVENFKEDLF DVLFCYFPIT FKPPKHDPYK ISNQDLKTAL RSAITATPLF AEDAYSNLLD 60
61 KLTASSPVVK NDTLLTLLEC VRKFGGSSIL ENWTLLWNAL KFEIMQNSEG NENTLLNPYN 120
121 KDQQSDDVGQ YTNYDACLKI INLMALQLYN FDKVSFEKFF THVLDELKPN FKYEKDLKQT 180
181 CQILSAIGSG NVEIFNKVIS STFPLFLINT SEVAKLKLLI MNFSFFVDSY IDLFGRTSKE 240
241 SLGTPVPNNK M
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [459-849] |
1 11 21 31 41 51
| | | | | |
1 AEYKDEIIMI LSMALTRSSK AEVTIRTLSV IQFTKMIKMK GFLTPEEVSL IIQYFTEEIL 60
61 TDNNKNIYYA CLEGLKTISE IYEDLVFEIS LKKLLDLLPD CFEEKIRVND EENIHIETIL 120
121 KIILDFTTSR HILVKESITF LATKLNRVAK ISKSREYCFL LISTIYSLFN NNNQNENVLN 180
181 EEDALALKNA IEPKLFEIIT QESAIVSDNY NLTLLSNVLF FTNLKIPQAA HQEELDRYNE 240
241 LFISEGKIRI LDTPNVLAIS YAKILSALNK NCQFPQKFTV LFGTVQLLKK HAPRMTETEK 300
301 LGYLELLLVL SNKFVSEKDV IGLFDWKDLS VINLEVMVWL TKGLIMQNSL ESSEIAKKFI 360
361 DLLSNEEIGS LVSKLFEVFV MDISSLKKFK G
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
| Term | Confidence | Notes |
| binding | 2.96084803796407 | bayes_pls_golite062009 |
| nucleic acid binding | 2.2915564382469 | bayes_pls_golite062009 |
| transcription regulator activity | 2.19067997822967 | bayes_pls_golite062009 |
| DNA binding | 1.71679738414596 | bayes_pls_golite062009 |
| protein binding | 1.61131270705552 | bayes_pls_golite062009 |
| transcription factor activity | 1.01026749293758 | bayes_pls_golite062009 |
| structural molecule activity | 0.851103372489505 | bayes_pls_golite062009 |
| structure-specific DNA binding | 0.384349606267362 | bayes_pls_golite062009 |
| translation regulator activity | 0.378889783888265 | bayes_pls_golite062009 |
| translation factor activity, nucleic acid binding | 0.348192604482187 | bayes_pls_golite062009 |
| RNA binding | 0.243875756041061 | bayes_pls_golite062009 |
| transcription activator activity | 0.142253868848261 | bayes_pls_golite062009 |
| transcription factor binding | 8.79739237675814E-4 | bayes_pls_golite062009 |
|
Region A: Residues: [850-1032] |
1 11 21 31 41 51
| | | | | |
1 ISWNNNVKIL YKQKFFGDIF QTLVSNYKNT VDMTIKCNYL TALSLVLKHT PSQSVGPFIN 60
61 DLFPLLLQAL DMPDPEVRVS ALETLKDTTD KHHTLITEHV STIVPLLLSL SLPHKYNSVS 120
121 VRLIALQLLE MITTVVPLNY CLSYQDDVLS ALIPVLSDKK RIIRKQCVDT RQVYYELGQI 180
181 PFE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
