Protein: | MET18 |
Organism: | Saccharomyces cerevisiae |
Length: | 1032 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MET18.
Description | E-value | Query Range |
Subject Range |
|
0.0 | [23..1027] | [28..1027] |
|
0.0 | [1..1032] | [1..1032] |
|
0.0 | [23..1027] | [27..1026] |
|
0.0 | [7..1024] | [3..1017] |
Region A: Residues: [1-207] |
1 11 21 31 41 51 | | | | | | 1 MTPDELNSAV VTFMANLNID DSKANETAST VTDSIVHRSI KLLEVVVALK DYFLSENEVE 60 61 RKKALTCLTT ILAKTPKDHL SKNECSVIFQ FYQSKLDDQA LAKEVLEGFA ALAPMKYVSI 120 121 NEIAQLLRLL LDNYQQGQHL ASTRLWPFKI LRKIFDRFFV NGSSTEQVKR INDLFIETFL 180 181 HVANGEKDPR NLLLSFALNK SITSSLQ |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [208-458] |
1 11 21 31 41 51 | | | | | | 1 NVENFKEDLF DVLFCYFPIT FKPPKHDPYK ISNQDLKTAL RSAITATPLF AEDAYSNLLD 60 61 KLTASSPVVK NDTLLTLLEC VRKFGGSSIL ENWTLLWNAL KFEIMQNSEG NENTLLNPYN 120 121 KDQQSDDVGQ YTNYDACLKI INLMALQLYN FDKVSFEKFF THVLDELKPN FKYEKDLKQT 180 181 CQILSAIGSG NVEIFNKVIS STFPLFLINT SEVAKLKLLI MNFSFFVDSY IDLFGRTSKE 240 241 SLGTPVPNNK M |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [459-849] |
1 11 21 31 41 51 | | | | | | 1 AEYKDEIIMI LSMALTRSSK AEVTIRTLSV IQFTKMIKMK GFLTPEEVSL IIQYFTEEIL 60 61 TDNNKNIYYA CLEGLKTISE IYEDLVFEIS LKKLLDLLPD CFEEKIRVND EENIHIETIL 120 121 KIILDFTTSR HILVKESITF LATKLNRVAK ISKSREYCFL LISTIYSLFN NNNQNENVLN 180 181 EEDALALKNA IEPKLFEIIT QESAIVSDNY NLTLLSNVLF FTNLKIPQAA HQEELDRYNE 240 241 LFISEGKIRI LDTPNVLAIS YAKILSALNK NCQFPQKFTV LFGTVQLLKK HAPRMTETEK 300 301 LGYLELLLVL SNKFVSEKDV IGLFDWKDLS VINLEVMVWL TKGLIMQNSL ESSEIAKKFI 360 361 DLLSNEEIGS LVSKLFEVFV MDISSLKKFK G |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Term | Confidence | Notes |
binding | 2.96084803796407 | bayes_pls_golite062009 |
nucleic acid binding | 2.2915564382469 | bayes_pls_golite062009 |
transcription regulator activity | 2.19067997822967 | bayes_pls_golite062009 |
DNA binding | 1.71679738414596 | bayes_pls_golite062009 |
protein binding | 1.61131270705552 | bayes_pls_golite062009 |
transcription factor activity | 1.01026749293758 | bayes_pls_golite062009 |
structural molecule activity | 0.851103372489505 | bayes_pls_golite062009 |
structure-specific DNA binding | 0.384349606267362 | bayes_pls_golite062009 |
translation regulator activity | 0.378889783888265 | bayes_pls_golite062009 |
translation factor activity, nucleic acid binding | 0.348192604482187 | bayes_pls_golite062009 |
RNA binding | 0.243875756041061 | bayes_pls_golite062009 |
transcription activator activity | 0.142253868848261 | bayes_pls_golite062009 |
transcription factor binding | 8.79739237675814E-4 | bayes_pls_golite062009 |
Region A: Residues: [850-1032] |
1 11 21 31 41 51 | | | | | | 1 ISWNNNVKIL YKQKFFGDIF QTLVSNYKNT VDMTIKCNYL TALSLVLKHT PSQSVGPFIN 60 61 DLFPLLLQAL DMPDPEVRVS ALETLKDTTD KHHTLITEHV STIVPLLLSL SLPHKYNSVS 120 121 VRLIALQLLE MITTVVPLNY CLSYQDDVLS ALIPVLSDKK RIIRKQCVDT RQVYYELGQI 180 181 PFE |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.