| Protein: | SEC24 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 926 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SEC24.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..926] | [1..926] |
|
|
0.0 | [9..926] | [182..1091] |
|
|
0.0 | [3..925] | [26..925] |
|
|
0.0 | [165..901] | [2..767] |
|
Region A: Residues: [1-279] |
1 11 21 31 41 51
| | | | | |
1 MSHHKKRVYP QAQLQYGQNA TPLQQPAQFM PPQDPAAAGM SYGQMGMPPQ GAVPSMGQQQ 60
61 FLTPAQEQLH QQIDQATTSM NDMHLHNVPL VDPNAYMQPQ VPVQMGTPLQ QQQQPMAAPA 120
121 YGQPSAAMGQ NMRPMNQLYP IDLLTELPPP ITDLTLPPPP LVIPPERMLV PSELSNASPD 180
181 YIRSTLNAVP KNSSLLKKSK LPFGLVIRPY QHLYDDIDPP PLNEDGLIVR CRRCRSYMNP 240
241 FVTFIEQGRR WRCNFCRLAN DVPMQMDQSD PNDPKSRYD
|
| Detection Method: |  |
| Confidence: | 13.79 |
| Match: | 1ldvA |
| Description: | No description for 1ldvA was found. |
| Term | Confidence | Notes |
| protein binding | 1.9315281375853 | bayes_pls_golite062009 |
| binding | 1.90456497151578 | bayes_pls_golite062009 |
| transporter activity | 1.30184925420876 | bayes_pls_golite062009 |
| collagen binding | 0.568860931913098 | bayes_pls_golite062009 |
| integrin binding | 0.56855067092085 | bayes_pls_golite062009 |
| nucleic acid binding | 0.464562340940318 | bayes_pls_golite062009 |
| protein complex binding | 0.35582708645524 | bayes_pls_golite062009 |
| DNA binding | 0.155617838235236 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.0661625326929309 | bayes_pls_golite062009 |
| pyrophosphatase activity | 0.027305897174472 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 0.0179622467180781 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 0.0153681945260867 | bayes_pls_golite062009 |
|
Region A: Residues: [280-339] |
1 11 21 31 41 51
| | | | | |
1 RNEIKCAVME YMAPKEYTLR QPPPATYCFL IDVSQSSIKS GLLATTINTL LQNLDSIPNH 60
61
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [340-691] |
1 11 21 31 41 51
| | | | | |
1 DERTRISILC VDNAIHYFKI PLDSENNEES ADQINMMDIA DLEEPFLPRP NSMVVSLKAC 60
61 RQNIETLLTK IPQIFQSNLI TNFALGPALK SAYHLIGGVG GKIIVVSGTL PNLGIGKLQR 120
121 RNESGVVNTS KETAQLLSCQ DSFYKNFTID CSKVQITVDL FLASEDYMDV ASLSNLSRFT 180
181 AGQTHFYPGF SGKNPNDIVK FSTEFAKHIS MDFCMETVMR ARGSTGLRMS RFYGHFFNRS 240
241 SDLCAFSTMP RDQSYLFEVN VDESIMADYC YVQVAVLLSL NNSQRRIRII TLAMPTTESL 300
301 AEVYASADQL AIASFYNSKA VEKALNSSLD DARVLINKSV QDILATYKKE IV
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [692-778] |
1 11 21 31 41 51
| | | | | |
1 VSNTAGGAPL RLCANLRMFP LLMHSLTKHM AFRSGIVPSD HRASALNNLE SLPLKYLIKN 60
61 IYPDVYSLHD MADEAGLPVQ TEDGEAT
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [779-844] |
1 11 21 31 41 51
| | | | | |
1 GTIVLPQPIN ATSSLFERYG LYLIDNGNEL FLWMGGDAVP ALVFDVFGTQ DIFDIPIGKQ 60
61 EIPVVE
|
| Detection Method: | |
| Confidence: | 2.69897 |
| Match: | 1svq__ |
| Description: | Severin, domain 2 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [845-926] |
1 11 21 31 41 51
| | | | | |
1 NSEFNQRVRN IINQLRNHDD VITYQSLYIV RGASLSEPVN HASAREVATL RLWASSTLVE 60
61 DKILNNESYR EFLQIMKARI SK
|
| Detection Method: | |
| Confidence: | 9.91 |
| Match: | 1m2vB |
| Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
|
