| Protein: | SPC97 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 823 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPC97.
| Description | E-value | Query Range |
Subject Range |
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0.0 | [1..823] | [1..823] |
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0.0 | [4..823] | [159..896] |
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0.0 | [4..823] | [159..899] |
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0.0 | [55..771] | [67..782] |
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0.0 | [51..793] | [193..806] |
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0.0 | [19..792] | [216..972] |
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0.0 | [46..787] | [176..804] |
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0.0 | [51..799] | [241..892] |
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Region A: Residues: [1-53] |
1 11 21 31 41 51
| | | | | |
1 MEIKEVDDRA ELLRYTNNIP LLGKLVNHQP LWSTNPKLKS FSLEKISAPD QRR
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| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.347 | a.4.1 | Homeodomain-like |
| View | Download | 0.360 | a.60.1 | SAM/Pointed domain |
| View | Download | 0.348 | a.60.4 | DNA repair protein Rad51, N-terminal domain |
| View | Download | 0.414 | g.58.1 | Pheromone ER-23 |
| View | Download | 0.354 | a.60.1 | SAM/Pointed domain |
| View | Download | 0.249 | a.5.7 | 4-hydroxy-2-oxovalerate aldolase DmpG, communication domain |
| View | Download | 0.247 | a.44.1 | Disulphide-bond formation facilitator (DSBA), insertion domain |
| View | Download | 0.236 | a.65.1 | Annexin |
| View | Download | 0.221 | a.5.1 | DNA helicase RuvA subunit, C-terminal domain |
|
Region A: Residues: [54-430] |
1 11 21 31 41 51
| | | | | |
1 VQEALVVKDL LNVLIGLEGT YIRYFNDYEP SDPETPIEFK IAKKMDPSFK TFSRRIVRYG 60
61 KQYMILTRAY EKWSDTSFGM VLQRFAYEIR RFLEDVYLKT LVERLERDFN KVPNFSIREL 120
121 EQIINETEVN KQMELLYNIY EEIFREIEER RTNQSSQEDF NNFMDSMKNE SSLHLRLMVA 180
181 FDTTVYPVPK GGAILKIFQQ KILENLGDRS SVMFLKKLLN NISQDYCTML YEWLTQGILN 240
241 DPYQEFMTYD DLEGKTDNIF DTRDRAWDTQ YFIRKDVLLR DCDSEEDKNL LFKMLRTGIL 300
301 LKVVRASLQI PTIPSNSSDI TIQEINDFAD LMEGSNLELY VDKCYSRANE IFLKLFFQGY 360
361 DLINVLKHLQ QIFLGYQ
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| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [431-544] |
1 11 21 31 41 51
| | | | | |
1 SGHNVLKFLT KNMGELTKHY RNDNNANYDK LLQNFELERQ SENPNNLMRQ LLMIQFDTET 60
61 LPQVLSHYLQ IYPEVPENNS ANDDSDPLMH ANNFKNMNAI LFDELSKERT GAYH
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| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.638 | a.1.1 | Globin-like |
| View | Download | 0.423 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.517 | a.64.1 | Saposin |
| View | Download | 0.638 | a.1.1 | Globin-like |
| View | Download | 0.517 | a.64.1 | Saposin |
| View | Download | 0.460 | a.1.1 | Globin-like |
| View | Download | 0.460 | a.1.1 | Globin-like |
| View | Download | 0.423 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.410 | i.11.1 | Computational models partly based on NMR data |
| View | Download | 0.410 | i.11.1 | Computational models partly based on NMR data |
| View | Download | 0.390 | a.77.1 | DEATH domain |
| View | Download | 0.379 | a.24.11 | Bacterial GAP domain |
| View | Download | 0.338 | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.334 | a.73.1 | Retrovirus capsid protein, N-terminal core domain |
| View | Download | 0.315 | a.29.2 | Bromodomain |
| View | Download | 0.306 | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.299 | a.71.1 | Endoplasmic reticulum protein ERP29, C-domain |
| View | Download | 0.293 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.286 | d.110.4 | SNARE-like |
| View | Download | 0.277 | d.87.2 | CO dehydrogenase flavoprotein C-terminal domain-like |
| View | Download | 0.257 | d.134.1 | Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 |
| View | Download | 0.254 | a.24.11 | Bacterial GAP domain |
| View | Download | 0.251 | a.116.1 | GTPase activation domain, GAP |
| View | Download | 0.243 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.242 | a.118.13 | Arp2/3 complex 16 kDa subunit ARPC5 |
| View | Download | 0.230 | d.92.1 | Metalloproteases ("zincins"), catalytic domain |
| View | Download | 0.223 | a.1.1 | Globin-like |
| View | Download | 0.220 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.220 | d.79.1 | YjgF-like |
| View | Download | 0.215 | a.66.1 | Transducin (alpha subunit), insertion domain |
| View | Download | 0.212 | d.211.1 | Ankyrin repeat |
| View | Download | 0.209 | a.177.1 | Sigma2 domain of RNA polymerase sigma factors |
| View | Download | 0.206 | c.55.1 | Actin-like ATPase domain |
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Region A: Residues: [545-823] |
1 11 21 31 41 51
| | | | | |
1 GSNLELYTPK SAIYHLKFDI NIPYPLNIII SRTCMIKYQI ILRYQLVLQY HSRLLDETWM 60
61 DLNKTPSWKY RGYSHTVKRR IVRATRVLHA KMNHFIKTIM EYFNQNVIDK EVYSLEKCYR 120
121 NPTLAVAIQN ELEGGLTNIM TNRCLSDLIP LQLQIFDIVY KFCKFIKSMR AKLCQLDPVL 180
181 YEKHKSGMMK TLNEGYRTNN GGQEDVGYQE DAALELIQKL IEYISNASSI FRKCLINFTQ 240
241 ELSTEKFDFY DSSSVDAAGI ERVLYSIVPP RSASASSQR
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| Detection Method: | |
| Confidence: | 8.03 |
| Match: | 1ldjA |
| Description: | Anaphase promoting complex (APC); Cullin homolog 1, Cul-1; Cullin homolog 1, cul-1 |
Matching Structure (courtesy of the PDB): |
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Region A: Residues: [720-823] |
1 11 21 31 41 51
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1 LDPVLYEKHK SGMMKTLNEG YRTNNGGQED VGYQEDAALE LIQKLIEYIS NASSIFRKCL 60
61 INFTQELSTE KFDFYDSSSV DAAGIERVLY SIVPPRSASA SSQR
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| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
