Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YAP1801.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..637] | [1..637] |
|
|
0.0 | [2..627] | [20..651] |
|
|
0.0 | [2..627] | [20..636] |
|
|
0.0 | [3..604] | [31..611] |
|
|
0.0 | [2..512] | [35..539] |
|
Region A: Residues: [1-122] |
1 11 21 31 41 51
| | | | | |
1 MTTYFKLVKG ATKIKSAPPK QKYLDPILLG TSNEEDFYEI VKGLDSRIND TAWTIVYKSL 60
61 LVVHLMIREG SKDVALRYYS RNLEFFDIEN IRGSNGSASG DMRALDRYDN YLKVRCREFG 120
121 KI
|
|
Region B: Residues: [167-192] |
1 11 21 31 41 51
| | | | | |
1 ALIKNKYTQY DLSNELIIFG FKLLIQ
|
| Detection Method: |  |
| Confidence: | 298.519517 |
| Match: | 1hf8A_ |
| Description: | Clathrin assembly lymphoid myeloid leukaemia protein, Calm |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| clathrin binding | 2.70535896247543 | bayes_pls_golite062009 |
| binding | 2.34501465852339 | bayes_pls_golite062009 |
| protein binding | 1.7891964555817 | bayes_pls_golite062009 |
| phosphatidylinositol-4,5-bisphosphate binding | 1.20269437433936 | bayes_pls_golite062009 |
| phosphoinositide binding | 0.87586037360588 | bayes_pls_golite062009 |
| phospholipid binding | 0.84481265656013 | bayes_pls_golite062009 |
| lipid binding | 0.176990783274449 | bayes_pls_golite062009 |
|
Region A: Residues: [123-166] |
1 11 21 31 41 51
| | | | | |
1 KKDYVRDGYR TLKLNSGNYG SSRNKQHSIN IALDHVESLE VQIQ
|
|
Region B: Residues: [193-271] |
1 11 21 31 41 51
| | | | | |
1 DLLALYNALN EGIITLLESF FELSHHNAER TLDLYKTFVD LTEHVVRYLK SGKTAGLKIP 60
61 VIKHITTKLV RSLEEHLIE
|
| Detection Method: | |
| Confidence: | 298.519517 |
| Match: | 1hf8A_ |
| Description: | Clathrin assembly lymphoid myeloid leukaemia protein, Calm |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [272-338] |
1 11 21 31 41 51
| | | | | |
1 DDKTHNTFVP VDSSQGSAGA VVAKSTAQER LEQIREQKRI LEAQLKNEQV AISPALTTVT 60
61 AAQSYNP
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.332 | 0.921 | clathrin binding | a.39.1 | EF-hand |
| View | Download | 0.306 | 0.921 | clathrin binding | a.4.1 | Homeodomain-like |
| View | Download | 0.297 | 0.921 | clathrin binding | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
| View | Download | 0.429 | 0.921 | clathrin binding | a.48.3 | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |
| View | Download | 0.322 | 0.921 | clathrin binding | a.5.6 | Hypothetical protein MTH1615 |
| View | Download | 0.264 | 0.921 | clathrin binding | a.60.12 | DNA polymerase beta-like, second domain |
| View | Download | 0.246 | 0.921 | clathrin binding | a.144.1 | PABC (PABP) domain |
| View | Download | 0.239 | 0.921 | clathrin binding | a.112.1 | Description not found. |
| View | Download | 0.237 | 0.921 | clathrin binding | a.32.1 | Transcription factor IIA (TFIIA), alpha-helical domain |
| View | Download | 0.237 | 0.921 | clathrin binding | a.2.3 | Chaperone J-domain |
| View | Download | 0.224 | 0.921 | clathrin binding | g.53.1 | TAZ domain |
| View | Download | 0.213 | 0.921 | clathrin binding | d.15.1 | Ubiquitin-like |
| View | Download | 0.210 | 0.921 | clathrin binding | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.207 | 0.921 | clathrin binding | d.58.11 | EF-G/eEF-2 domains III and V |
| View | Download | 0.206 | 0.921 | clathrin binding | a.112.1 | Description not found. |
|
Region A: Residues: [339-637] |
1 11 21 31 41 51
| | | | | |
1 FGTDSSMHTN IPMAVANQTQ QIANNPFVSQ TQPQVMNTPT AHTEPANLNV PEYAAVQHTV 60
61 NFNPVQDAGV SAQQTGYYSI NNHLTPTFTG AGFGGYSVSQ DTTAASNQQV SHSQTGSNNP 120
121 FALHNAATIA TGNPAHENVL NNPFSRPNFD EQNTNMPLQQ QIISNPFQNQ TYNQQQFQQQ 180
181 KMPLSSINSV MTTPTSMQGS MNIPQRFDKM EFQAHYTQNH LQQQQQQQQQ QQQQQQQQPQ 240
241 QGYYVPATAG ANPVTNITGT VQPQNFPFYP QQQPQPEQSQ TQQPVLGNQY ANNLNLIDM
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
