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Protein Overview: CAP9_ARATH

General Information:
Name(s) found: CAP9_ARATH [Swiss-Prot]
Description(s) found:
Found 12 descriptions.
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  • Putative clathrin assembly protein At1g14910 OS=Arabidopsis thaliana GN=At1g14910 PE=2 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 692 amino acids

    Gene Ontology:
    Cellular Component: clathrin coat [IEA]
    mitochondrion [IEA]
    Biological Process: clathrin coat assembly [IEA]
    Molecular Function: clathrin binding [IEA]
    binding [ISS]
    phospholipid binding [IEA]
    phosphatidylinositol binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGTLQSWRRA YGALKDTTKV GLVRVNSDYA ELDVAIVKAT NHVECPPKDR HLRKIFLATS  60
   61 AIRPRADVAY CIHALSRRLH KTRNWTVALK ALLVIHRLLR DGDPTFREEL LNFSQKGRIM 120
  121 QISNFKDDSS PVAWDCSGWV RTYALFLEER LECFRVLKYD IEAERLPKVS PGQEKGYSKT 180
  181 RDLDGEKLLE QLPALQQLLH RLIGCKPEGA AKHNHIIQYA LSLVLKESFK VYCAINEGII 240
  241 NLVEKFFEMP RHEAIKALEI YKRAGLQAGN LSAFYEVCKG LELARNFQFP VLREPPQSFL 300
  301 TTMEEYMRDA PQMVDVTSGP LLLTYTPDDG LTSEDVGPSH EEHETSSPSD SAVVPSEETQ 360
  361 LSSQSPPSVE TPQNFIDTDD LLGLHDDTPD PLAILDQNAL ALALVSNDVD SSPFSFGQAR 420
  421 DLDPSGWELA LVTTPSNDIS AATERQLAGG LDTLTLNSLY DDGALRAAQQ PAYGVPASNP 480
  481 FEVQDLFAFS DSVSPPSAVN NPFGLYEPTY HQQEQQPQLQ VAPSPANPFG DFGEFPIVPV 540
  541 SEPQSTTSFG AFPVPVSEPS NTTGFGEIPV VPVTEPPNTT AFGEFPVVPV SEPQNITGFG 600
  601 ALPVTPASEP SNTTGFGEFP VVSVSAPQNT TGFGALPVIP VSEPSKTTGL GEFPVVPVSE 660
  661 PQNTTGFGEF PVNAGAHEQH NSNNPFGSTG FL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..286] PSI-BLAST 97.30103 Clathrin assembly lymphoid myeloid leukaemia protein, Calm
    2 View Details [287..692] PSI-BLAST 4.39794 No description for 1y0fB was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.229007340928547 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle