| Protein: | MCM6 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1017 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MCM6.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [172..1009] | [21..821] |
|
|
0.0 | [156..1009] | [8..821] |
|
|
0.0 | [172..1009] | [22..824] |
|
|
0.0 | [172..1008] | [16..817] |
|
|
0.0 | [176..983] | [27..793] |
|
|
0.0 | [70..1015] | [32..889] |
|
Region A: Residues: [1-94] |
1 11 21 31 41 51
| | | | | |
1 MSSPFPADTP SSNRPSNSSP PPSSIGAGFG SSSGLDSQIG SRLHFPSSSQ PHVSNSQTGP 60
61 FVNDSTQFSS QRLQTDGSAT NDMEGNEPAR SFKS
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [95-269] |
1 11 21 31 41 51
| | | | | |
1 RALNHVKKVD DVTGEKVREA FEQFLEDFSV QSTDTGEVEK VYRAQIEFMK IYDLNTIYID 60
61 YQHLSMRENG ALAMAISEQY YRFLAFLQKG LRRVVRKYAP ELLNTSDSLK RSEGDEGQAD 120
121 EDEQQDDDMN GSSLPRDSGS SAAPGNGTSA MATRSITTST SPEQTERVFQ ISFFN
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [270-446] |
1 11 21 31 41 51
| | | | | |
1 LPTVHRIRDI RSEKIGSLLS ISGTVTRTSE VRPELYKASF TCDMCRAIVD NVEQSFKYTE 60
61 PTFCPNPSCE NRAFWTLNVT RSRFLDWQKV RIQENANEIP TGSMPRTLDV ILRGDSVERA 120
121 KPGDRCKFTG VEIVVPDVTQ LGLPGVKPSS TLDTRGISKT TEGLNSGVTG LRSLGVR
|
| Detection Method: | |
| Confidence: | 7.055517 |
| Match: | PF00493 |
| Description: | MCM2/3/5 family |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [447-527] |
1 11 21 31 41 51
| | | | | |
1 DLTYKISFLA CHVISIGSNI GASSPDANSN NRETELQMAA NLQANNVYQD NERDQEVFLN 60
61 SLSSDEINEL KEMVKDEHIY D
|
| Detection Method: | |
| Confidence: | 2.69897 |
| Match: | 1dbwA_ |
| Description: | Transcriptional regulatory protein FixJ, receiver domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [528-759] |
1 11 21 31 41 51
| | | | | |
1 KLVRSIAPAV FGHEAVKKGI LLQMLGGVHK STVEGIKLRG DINICVVGDP STSKSQFLKY 60
61 VVGFAPRSVY TSGKASSAAG LTAAVVRDEE GGDYTIEAGA LMLADNGICC IDEFDKMDIS 120
121 DQVAIHEAME QQTISIAKAG IHATLNARTS ILAAANPVGG RYNRKLSLRG NLNMTAPIMS 180
181 RFDLFFVILD DCNEKIDTEL ASHIVDLHMK RDEAIEPPFS AEQLRRYIKY AR
|
| Detection Method: | |
| Confidence: | 48.69897 |
| Match: | 1g8pA_ |
| Description: | ATPase subunit of magnesium chelatase, BchI |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [760-867] |
1 11 21 31 41 51
| | | | | |
1 TFKPILTKEA RSYLVEKYKE LRKDDAQGFS RSSYRITVRQ LESMIRLSEA IARANCVDEI 60
61 TPSFIAEAYD LLRQSIIRVD VDDVEMDEEF DNIESQSHAA SGNNDDND
|
| Detection Method: | |
| Confidence: | 48.69897 |
| Match: | 1g8pA_ |
| Description: | ATPase subunit of magnesium chelatase, BchI |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [868-1017] |
1 11 21 31 41 51
| | | | | |
1 DGTGSGVITS EPPADIEEGQ SEATARPGTS EKKKTTVTYD KYVSMMNMIV RKIAEVDREG 60
61 AEELTAVDIV DWYLLQKEND LGSLAEYWEE RRLAFKVIKR LVKDRILMEI HGTRHNLRDL 120
121 ENEENENNKT VYVIHPNCEV LDQLEPQDSS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
