Protein: | MCM6 |
Organism: | Saccharomyces cerevisiae |
Length: | 1017 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MCM6.
Description | E-value | Query Range |
Subject Range |
|
0.0 | [172..1009] | [21..821] |
|
0.0 | [156..1009] | [8..821] |
|
0.0 | [172..1009] | [22..824] |
|
0.0 | [172..1008] | [16..817] |
|
0.0 | [176..983] | [27..793] |
|
0.0 | [70..1015] | [32..889] |
Region A: Residues: [1-94] |
1 11 21 31 41 51 | | | | | | 1 MSSPFPADTP SSNRPSNSSP PPSSIGAGFG SSSGLDSQIG SRLHFPSSSQ PHVSNSQTGP 60 61 FVNDSTQFSS QRLQTDGSAT NDMEGNEPAR SFKS |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
MCM Score |
SCOP Match |
SCOP Description | ||
View | Download | 0.405 | a.74.1 | Cyclin-like |
View | Download | 0.339 | a.150.1 | Anti-sigma factor AsiA |
Region A: Residues: [95-269] |
1 11 21 31 41 51 | | | | | | 1 RALNHVKKVD DVTGEKVREA FEQFLEDFSV QSTDTGEVEK VYRAQIEFMK IYDLNTIYID 60 61 YQHLSMRENG ALAMAISEQY YRFLAFLQKG LRRVVRKYAP ELLNTSDSLK RSEGDEGQAD 120 121 EDEQQDDDMN GSSLPRDSGS SAAPGNGTSA MATRSITTST SPEQTERVFQ ISFFN |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [270-446] |
1 11 21 31 41 51 | | | | | | 1 LPTVHRIRDI RSEKIGSLLS ISGTVTRTSE VRPELYKASF TCDMCRAIVD NVEQSFKYTE 60 61 PTFCPNPSCE NRAFWTLNVT RSRFLDWQKV RIQENANEIP TGSMPRTLDV ILRGDSVERA 120 121 KPGDRCKFTG VEIVVPDVTQ LGLPGVKPSS TLDTRGISKT TEGLNSGVTG LRSLGVR |
Detection Method: | |
Confidence: | 7.055517 |
Match: | PF00493 |
Description: | MCM2/3/5 family |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [447-527] |
1 11 21 31 41 51 | | | | | | 1 DLTYKISFLA CHVISIGSNI GASSPDANSN NRETELQMAA NLQANNVYQD NERDQEVFLN 60 61 SLSSDEINEL KEMVKDEHIY D |
Detection Method: | |
Confidence: | 2.69897 |
Match: | 1dbwA_ |
Description: | Transcriptional regulatory protein FixJ, receiver domain |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [528-759] |
1 11 21 31 41 51 | | | | | | 1 KLVRSIAPAV FGHEAVKKGI LLQMLGGVHK STVEGIKLRG DINICVVGDP STSKSQFLKY 60 61 VVGFAPRSVY TSGKASSAAG LTAAVVRDEE GGDYTIEAGA LMLADNGICC IDEFDKMDIS 120 121 DQVAIHEAME QQTISIAKAG IHATLNARTS ILAAANPVGG RYNRKLSLRG NLNMTAPIMS 180 181 RFDLFFVILD DCNEKIDTEL ASHIVDLHMK RDEAIEPPFS AEQLRRYIKY AR |
Detection Method: | |
Confidence: | 48.69897 |
Match: | 1g8pA_ |
Description: | ATPase subunit of magnesium chelatase, BchI |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [760-867] |
1 11 21 31 41 51 | | | | | | 1 TFKPILTKEA RSYLVEKYKE LRKDDAQGFS RSSYRITVRQ LESMIRLSEA IARANCVDEI 60 61 TPSFIAEAYD LLRQSIIRVD VDDVEMDEEF DNIESQSHAA SGNNDDND |
Detection Method: | |
Confidence: | 48.69897 |
Match: | 1g8pA_ |
Description: | ATPase subunit of magnesium chelatase, BchI |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [868-1017] |
1 11 21 31 41 51 | | | | | | 1 DGTGSGVITS EPPADIEEGQ SEATARPGTS EKKKTTVTYD KYVSMMNMIV RKIAEVDREG 60 61 AEELTAVDIV DWYLLQKEND LGSLAEYWEE RRLAFKVIKR LVKDRILMEI HGTRHNLRDL 120 121 ENEENENNKT VYVIHPNCEV LDQLEPQDSS |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
MCM Score |
SCOP Match |
SCOP Description | ||
View | Download | 0.396 | a.133.1 | Phospholipase A2, PLA2 |
View | Download | 0.251 | f.1.4 | Bcl-2 inhibitors of programmed cell death |
View | Download | 0.253 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
View | Download | 0.423 | d.189.1 | PX domain |
View | Download | 0.278 | a.1.2 | alpha-helical ferredoxin |
View | Download | 0.279 | a.60.9 | lambda integrase-like, N-terminal domain |
View | Download | 0.272 | d.58.34 | Formiminotransferase domain of formiminotransferase-cyclodeaminase. |
View | Download | 0.492 | a.78.1 | Fatty acid responsive transcription factor FadR, C-terminal domain |
View | Download | 0.281 | d.58.26 | GHMP Kinase, C-terminal domain |
View | Download | 0.266 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
View | Download | 0.258 | a.133.1 | Phospholipase A2, PLA2 |
View | Download | 0.222 | a.74.1 | Cyclin-like |
View | Download | 0.219 | d.153.2 | Hypothetical protein MTH1020 |
View | Download | 0.215 | d.110.4 | SNARE-like |