| Protein: | GLN3 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 730 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GLN3.
| Description | E-value | Query Range |
Subject Range |
|
|
2.0E-73 | [21..721] | [113..823] |
|
|
1.0E-71 | [1..730] | [1..730] |
|
|
8.0E-69 | [189..719] | [590..1124] |
|
|
1.0E-57 | [9..719] | [1837..2560] |
|
|
3.0E-57 | [8..716] | [110..824] |
|
|
3.0E-57 | [8..716] | [110..824] |
|
Region A: Residues: [1-197] |
1 11 21 31 41 51
| | | | | |
1 MQDDPENSKL YDLLNSHLDV HGRSNEEPRQ TGDSRSQSSG NTGENEEDIA FASGLNGGTF 60
61 DSMLEALPDD LYFTDFVSPF TAAATTSVTT KTVKDTTPAT NHMDDDIAMF DSLATTQPID 120
121 IAASNQQNGE IAQLWDFNVD QFNMTPSNSS GSATISAPNS FTSDIPQYNH GSLGNSVSKS 180
181 SLFPYNSSTS NSNINQP
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [198-281] |
1 11 21 31 41 51
| | | | | |
1 SINNNSNTNA QSHHSFNIYK LQNNNSSSSA MNITNNNNSN NSNIQHPFLK KSDSIGLSSS 60
61 NTTNSVRKNS LIKPMSSTSL ANFK
|
| Detection Method: | |
| Confidence: | 91.37734 |
| Match: | 1gnf__ |
| Description: | Erythroid transcription factor GATA-1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [282-362] |
1 11 21 31 41 51
| | | | | |
1 RAASVSSSIS NMEPSGQNKK PLIQCFNCKT FKTPLWRRSP EGNTLCNACG LFQKLHGTMR 60
61 PLSLKSDVIK KRISKKRAKQ T
|
| Detection Method: | |
| Confidence: | 149.383689 |
| Match: | 4gatA_ |
| Description: | Erythroid transcription factor GATA-1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 4.00967542385368 | bayes_pls_golite062009 |
| DNA binding | 3.60745514727532 | bayes_pls_golite062009 |
| nucleic acid binding | 3.47256374293954 | bayes_pls_golite062009 |
| binding | 2.96409924710655 | bayes_pls_golite062009 |
| transcription activator activity | 2.9532663930699 | bayes_pls_golite062009 |
| transcription factor activity | 2.90769972671972 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 2.72967350701574 | bayes_pls_golite062009 |
| protein binding | 2.44501340584871 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 2.40923942043513 | bayes_pls_golite062009 |
| ligand-dependent nuclear receptor activity | 1.49515149729803 | bayes_pls_golite062009 |
| transcription factor binding | 1.38523780690867 | bayes_pls_golite062009 |
| specific RNA polymerase II transcription factor activity | 1.26452462867497 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 0.68943696300126 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.58115018700114 | bayes_pls_golite062009 |
| transcription repressor activity | 0.256420113528322 | bayes_pls_golite062009 |
| catalytic activity | 0.101795606736461 | bayes_pls_golite062009 |
| structural constituent of ribosome | 0.0613150171780344 | bayes_pls_golite062009 |
|
Region A: Residues: [363-524] |
1 11 21 31 41 51
| | | | | |
1 DPNIAQNTPS APATASTSVT TTNAKPIRSR KKSLQQNSLS RVIPEEIIRD NIGNTNNILN 60
61 VNRGGYNFNS VPSPVLMNSQ SYNSSNANFN GASNANLNSN NLMRHNSNTV TPNFRRSSRR 120
121 SSTSSNTSSS SKSSSRSVVP ILPKPSPNSA NSQQFNMNMN LM
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [525-730] |
1 11 21 31 41 51
| | | | | |
1 NTTNNVSAGN SVASSPRIIS SANFNSNSPL QQNLLSNSFQ RQGMNIPRRK MSRNASYSSS 60
61 FMAASLQQLH EQQQVDVNSN TNTNSNRQNW NSSNSVSTNS RSSNFVSQKP NFDIFNTPVD 120
121 SPSVSRPSSR KSHTSLLSQQ LQNSESNSFI SNHKFNNRLS SDSTSPIKYE ADVSAGGKIS 180
181 EDNSTKGSSK ESSAIADELD WLKFGI
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
