| Protein: | SMT3 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 101 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SMT3.
| Description | E-value | Query Range |
Subject Range |
|
|
5.0E-32 | [9..100] | [59..151] |
|
|
1.0E-30 | [4..100] | [207..310] |
|
Region A: Residues: [1-101] |
1 11 21 31 41 51
| | | | | |
1 MSDSEVNQEA KPEVKPEVKP ETHINLKVSD GSSEIFFKIK KTTPLRRLME AFAKRQGKEM 60
61 DSLRFLYDGI RIQADQTPED LDMEDNDIIE AHREQIGGAT Y
|
| Detection Method: |  |
| Confidence: | 487.69897 |
| Match: | 1l2nA_ |
| Description: | SUMO-1 (smt3 homologue) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| SUMO ligase activity | 3.84399877513864 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 3.71144418714309 | bayes_pls_golite062009 |
| ubiquitin-protein ligase activity | 2.89535476350045 | bayes_pls_golite062009 |
| binding | 2.786655943372 | bayes_pls_golite062009 |
| acid-amino acid ligase activity | 2.72499875710239 | bayes_pls_golite062009 |
| transcription regulator activity | 2.21955949922709 | bayes_pls_golite062009 |
| protein tag | 2.15059229834935 | bayes_pls_golite062009 |
| protein binding | 1.86841453215444 | bayes_pls_golite062009 |
| DNA binding | 1.86539227646379 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 1.73491621577173 | bayes_pls_golite062009 |
| nucleic acid binding | 1.69351004422121 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 1.30022874337859 | bayes_pls_golite062009 |
| tubulin binding | 0.984710328639471 | bayes_pls_golite062009 |
| ligase activity, forming carbon-nitrogen bonds | 0.753885975469065 | bayes_pls_golite062009 |
| microtubule binding | 0.721760846967789 | bayes_pls_golite062009 |
| signal transducer activity | 0.65988002090613 | bayes_pls_golite062009 |
| molecular transducer activity | 0.65988002090613 | bayes_pls_golite062009 |
| structural constituent of ribosome | 0.599634454232833 | bayes_pls_golite062009 |
| structural molecule activity | 0.576819726104993 | bayes_pls_golite062009 |
| structure-specific DNA binding | 0.570143717979967 | bayes_pls_golite062009 |
| protein kinase activity | 0.325253662829604 | bayes_pls_golite062009 |
| single-stranded DNA binding | 0.249928925871521 | bayes_pls_golite062009 |
| enzyme binding | 0.240262781026149 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.0871262449740772 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 0.0816453389356582 | bayes_pls_golite062009 |
| kinase activity | 0.0363894273406812 | bayes_pls_golite062009 |
