| Protein: | YPS7 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 596 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YPS7.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..582] | [1..582] |
|
|
0.0 | [6..442] | [31..379] |
|
|
0.0 | [6..443] | [45..415] |
|
|
0.0 | [6..442] | [31..379] |
|
|
0.0 | [5..443] | [51..413] |
|
|
0.0 | [48..441] | [70..396] |
|
|
0.0 | [1..442] | [1..395] |
|
Region A: Residues: [1-56] |
1 11 21 31 41 51
| | | | | |
1 MTCLILWYLW LISTFQLEFA TASTANTTTT AKSGTSSSTE EPFPVLAVGK DGRGNY
|
|
Region B: Residues: [227-514] |
1 11 21 31 41 51
| | | | | |
1 ESSSYSLWLA GDTSTYKTYR DPISNCGKLL LGGVDPSLFT GTLGKFDLIP YVDPVSNAVS 60
61 VGYPIVPLGP IYIVSNSGQS LNMTSKDFLS PALLDSTSSV SYLPTSTIIQ IAVQIAATYV 120
121 ESLDRWLVQC SIADMGVSLG FRLRELTIEI PLRDLLSSTY DTSTNSSMFF SSGQEACFLT 180
181 LYANTNTGVN ILGEAFIKNI YMAMDLEDNT IAIAQAKKVE DDAVTEETNE TTASTIIKKI 240
241 KSGYIPYAKV MNSSNTRNLT LYPSYRSGYM FTVPGQLTAA YSNGVITG
|
| Detection Method: |  |
| Confidence: | 150.491979 |
| Match: | 1j71A_ |
| Description: | Acid protease |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| peptidase activity | 2.20821737779692 | bayes_pls_golite062009 |
| endopeptidase activity | 2.15355609364204 | bayes_pls_golite062009 |
| peptidase activity, acting on L-amino acid peptides | 2.06475762129734 | bayes_pls_golite062009 |
| catalytic activity | 1.54514410489082 | bayes_pls_golite062009 |
| hydrolase activity | 1.39298582879132 | bayes_pls_golite062009 |
| aspartic-type endopeptidase activity | 1.26508476841498 | bayes_pls_golite062009 |
| aspartic-type peptidase activity | 1.26508476841498 | bayes_pls_golite062009 |
| binding | 0.507703606557062 | bayes_pls_golite062009 |
| protein binding | 0.177729352622294 | bayes_pls_golite062009 |
|
Region A: Residues: [57-226] |
1 11 21 31 41 51
| | | | | |
1 YVNSTFGTPG QRQRLLVDII QPYINLVSGT SESHNEYSGV YHKHPSYLMN DSTSSVPVSP 60
61 GQIYEISFID GRAVNCTLVT DDMNFTNVSS ENSSTALITD LMVTRDNVQF NSGSLSISNV 120
121 SFFDIQSSNF KTSGLLGLSG KVTNPGNAID SSQYTEQSYF LSLLKDADII
|
| Detection Method: | |
| Confidence: | 150.491979 |
| Match: | 1j71A_ |
| Description: | Acid protease |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [515-596] |
1 11 21 31 41 51
| | | | | |
1 AGRSFYDTSR ASTSARPSST QFDSFSVSAS EEWSNSTNRT SSASGAGVRL SSPYTFNKDP 60
61 AGHVTRIASL LLLSIFSILI VL
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.371 | a.61.1 | Retroviral matrix proteins |
| View | Download | 0.466 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.325 | a.156.1 | S13-like H2TH domain |
| View | Download | 0.369 | d.217.1 | SAND domain-like |
| View | Download | 0.502 | d.56.1 | GroEL-intermediate domain like |
| View | Download | 0.298 | b.36.1 | PDZ domain-like |
| View | Download | 0.266 | a.3.1 | Cytochrome c |
| View | Download | 0.260 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.209 | a.60.1 | SAM/Pointed domain |
