| Protein: | PEP7 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 515 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PEP7.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..515] | [1..515] |
|
|
2.0E-69 | [8..511] | [41..530] |
|
|
6.0E-52 | [4..508] | [12..502] |
|
|
3.0E-47 | [176..507] | [594..917] |
|
|
5.0E-46 | [4..424] | [12..382] |
|
|
4.0E-43 | [4..452] | [19..471] |
|
Region A: Residues: [1-158] |
1 11 21 31 41 51
| | | | | |
1 MDLENVSCPI CLRKFDNLQA LNAHLDVEHG FNDNEDSLGS NDSRLVNGKQ KKARSVDSSA 60
61 QKLKRSHWEK FKKGKSCCHT CGRTLNNNIG AINCRKCGKL YCRRHLPNMI KLNLSAQYDP 120
121 RNGKWYNCCH DCFVTKPGYN DYGEVIDLTP EFFKVRNI
|
| Detection Method: |  |
| Confidence: | 10.91 |
| Match: | 1dvpA |
| Description: | Hrs |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [159-307] |
1 11 21 31 41 51
| | | | | |
1 KREDKNLRLL QLENRFVRLV DGLITLYNTY SRSIIHNLKM NSEMSKLERT VTPWRDDRSV 60
61 LFCNICSEPF GLLLRKHHCR LCGMVVCDDA NRNCSNEISI GYLMSAASDL PFEYNIQKDD 120
121 LLHIPISIRL CSHCIDMLFI GRKFNKDVR
|
| Detection Method: | |
| Confidence: | 53.69897 |
| Match: | 1vfyA_ |
| Description: | vps27p protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| clathrin binding | 4.23430630035276 | bayes_pls_golite062009 |
| binding | 2.35694469334775 | bayes_pls_golite062009 |
| phosphoinositide binding | 1.5307798253901 | bayes_pls_golite062009 |
| protein binding | 1.44642175542767 | bayes_pls_golite062009 |
| phospholipid binding | 1.34712325037196 | bayes_pls_golite062009 |
| transporter activity | 1.32696426532114 | bayes_pls_golite062009 |
| ADP-ribosylation factor binding | 1.08699679453397 | bayes_pls_golite062009 |
| protein transporter activity | 1.00558105390757 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.934511830388366 | bayes_pls_golite062009 |
| histone binding | 0.75399983087006 | bayes_pls_golite062009 |
| phosphatidylinositol binding | 0.67214549237381 | bayes_pls_golite062009 |
| lipid binding | 0.131242568396849 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.0347989334053008 | bayes_pls_golite062009 |
|
Region A: Residues: [308-515] |
1 11 21 31 41 51
| | | | | |
1 MPLSGIFAKY DSMQNISKVI DSLLPIFEDS LNSLKVETAK DSENTLDPKN LNDLARLRHK 60
61 LLNSFNLYNT LTRQLLSVEP QSHLERQLQN SIKIASAAYI NEKILPLKSL PAILNPEGHK 120
121 TNEDGQKAEP EVKKLSQLMI ENLTIKEVKE LREELMVLKE QSYLIESTIQ DYKKQRRLEE 180
181 IVTLNKNLEE LHSRIHTVQS KLGDHGFN
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
