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Protein Overview: pep7

General Information:
Name(s) found: pep7 / SPAC17G6.08 [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
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  • prevacuole/endosomal FYVE tethering component Pep7 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 536 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDALink to PubMed article]
    Golgi apparatus [IDALink to PubMed article]
    Biological Process: vesicle fusion [ISSLink to PubMed article]
    vesicle docking during exocytosis [ISSLink to PubMed article]
    Golgi to vacuole transport [ISSLink to PubMed article]
    Molecular Function: zinc ion binding [IEA]
    phosphatidylinositol-3-phosphate binding [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQNGKRRIGV RISSNLSNHS GTNLSTSAQS DSSNIVKATE CPICGLELPN LSALNDHLDV  60
   61 THFNDNEKIH KRQDSINSWL TRTLNGASAL QMKAAQRLWR MEPYEQNGDS SGAVGLEATK 120
  121 LTDSLVVKNH WQPEVPDMVC HDPMCDKLLN FINGHIHCRK CGYIFCNFHS MYQIKLSIHA 180
  181 TYDSENGFWC RVCRECYEGR PGYNDSNGLI RSRFQTFETF RKPLADKRRI EFLRLSKRMK 240
  241 KLEELWTSEN VSMLDALLLN KAKRLEQSIV HWQDDSVVQI CPECNNSFTL TRRRRHCRLC 300
  301 GRVICRFCVL EISLPQHPQP LLICMSCNQN YFRNVLYQTE RSKSLGYIRH IEHLQVFRQA 360
  361 MVNYYRLYED SLSELLSGEI ITEATLKIVK DRRKKFLELC VKYDGTMKKI ANHPSSNDAE 420
  421 EQFKQNVVNE AKRYLQETIL RLQAIPYHLQ VGQAWTSESE RELEKKKEQV EKKQEELMQT 480
  481 RIVLEEQVFL VENMIEDAKA KRKFSEVETL LSSLAPLHEE IHSITEKIHD LDLFDI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..201] FFAS03 3.93 Hrs
    2 View Details [202..340] PSI-BLAST 18.522879 Hrs
    3 View Details [341..536] MSA 8.248997 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • clathrin binding
    		•  3.73410287330383 bayes_pls_golite062009
  • binding
    		•  2.26426010117912 bayes_pls_golite062009
  • protein binding
    		•  1.53664633945707 bayes_pls_golite062009
  • transporter activity
    		•  1.33264421804057 bayes_pls_golite062009
  • phosphoinositide binding
    		•  1.19034196920111 bayes_pls_golite062009
  • phospholipid binding
    		•  1.09010543599677 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.929797787738847 bayes_pls_golite062009
  • histone binding
    		•  0.440372329067948 bayes_pls_golite062009
  • ADP-ribosylation factor binding
    		•  0.380739386302308 bayes_pls_golite062009
  • phosphatidylinositol binding
    		•  0.251953910109229 bayes_pls_golite062009
  • protein transporter activity
    		•  0.202584480444 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
    		•  0.0446344906851331 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  0.00643795263722946 bayes_pls_golite062009
    2
    Term Confidence Notes
  • binding
    		•  2.35694469334775 bayes_pls_golite062009
  • protein binding
    		•  1.6308789519356 bayes_pls_golite062009
  • phosphoinositide binding
    		•  1.5307798253901 bayes_pls_golite062009
  • phospholipid binding
    		•  1.34712325037196 bayes_pls_golite062009
  • transporter activity
    		•  1.32696426532114 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.934511830388366 bayes_pls_golite062009
  • histone binding
    		•  0.75399983087006 bayes_pls_golite062009
  • phosphatidylinositol binding
    		•  0.67214549237381 bayes_pls_golite062009
  • protein transporter activity
    		•  0.34592195726032 bayes_pls_golite062009
  • lipid binding
    		•  0.131242568396849 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
    		•  0.0347989334053008 bayes_pls_golite062009
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle