| Protein: | pep7 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 536 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for pep7.
| Description | E-value | Query Range |
Subject Range |
|
|
320.0 | [0..5] | [532..64] |
|
|
315.0 | [0..9] | [532..68] |
|
|
304.0 | [0..14] | [533..53] |
|
|
304.0 | [0..48] | [532..85] |
|
|
295.0 | [0..17] | [533..56] |
|
|
292.0 | [0..15] | [532..65] |
|
|
286.0 | [0..39] | [533..85] |
|
|
280.0 | [0..17] | [536..56] |
|
|
276.0 | [0..12] | [530..2] |
|
|
273.0 | [0..17] | [533..56] |
|
Region A: Residues: [1-201] |
1 11 21 31 41 51
| | | | | |
1 MQNGKRRIGV RISSNLSNHS GTNLSTSAQS DSSNIVKATE CPICGLELPN LSALNDHLDV 60
61 THFNDNEKIH KRQDSINSWL TRTLNGASAL QMKAAQRLWR MEPYEQNGDS SGAVGLEATK 120
121 LTDSLVVKNH WQPEVPDMVC HDPMCDKLLN FINGHIHCRK CGYIFCNFHS MYQIKLSIHA 180
181 TYDSENGFWC RVCRECYEGR P
|
| Detection Method: |  |
| Confidence: | 3.93 |
| Match: | 1dvpA |
| Description: | Hrs |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| clathrin binding | 3.73410287330383 | bayes_pls_golite062009 |
| binding | 2.26426010117912 | bayes_pls_golite062009 |
| protein binding | 1.53664633945707 | bayes_pls_golite062009 |
| transporter activity | 1.33264421804057 | bayes_pls_golite062009 |
| phosphoinositide binding | 1.19034196920111 | bayes_pls_golite062009 |
| phospholipid binding | 1.09010543599677 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.929797787738847 | bayes_pls_golite062009 |
| histone binding | 0.440372329067948 | bayes_pls_golite062009 |
| ADP-ribosylation factor binding | 0.380739386302308 | bayes_pls_golite062009 |
| phosphatidylinositol binding | 0.251953910109229 | bayes_pls_golite062009 |
| protein transporter activity | 0.202584480444 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.0446344906851331 | bayes_pls_golite062009 |
| pyrophosphatase activity | 0.00643795263722946 | bayes_pls_golite062009 |
|
Region A: Residues: [202-340] |
1 11 21 31 41 51
| | | | | |
1 GYNDSNGLIR SRFQTFETFR KPLADKRRIE FLRLSKRMKK LEELWTSENV SMLDALLLNK 60
61 AKRLEQSIVH WQDDSVVQIC PECNNSFTLT RRRRHCRLCG RVICRFCVLE ISLPQHPQPL 120
121 LICMSCNQNY FRNVLYQTE
|
| Detection Method: | |
| Confidence: | 18.522879 |
| Match: | 1dvpA |
| Description: | Hrs |
| Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.35694469334775 | bayes_pls_golite062009 |
| protein binding | 1.6308789519356 | bayes_pls_golite062009 |
| phosphoinositide binding | 1.5307798253901 | bayes_pls_golite062009 |
| phospholipid binding | 1.34712325037196 | bayes_pls_golite062009 |
| transporter activity | 1.32696426532114 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.934511830388366 | bayes_pls_golite062009 |
| histone binding | 0.75399983087006 | bayes_pls_golite062009 |
| phosphatidylinositol binding | 0.67214549237381 | bayes_pls_golite062009 |
| protein transporter activity | 0.34592195726032 | bayes_pls_golite062009 |
| lipid binding | 0.131242568396849 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.0347989334053008 | bayes_pls_golite062009 |
|
Region A: Residues: [341-536] |
1 11 21 31 41 51
| | | | | |
1 RSKSLGYIRH IEHLQVFRQA MVNYYRLYED SLSELLSGEI ITEATLKIVK DRRKKFLELC 60
61 VKYDGTMKKI ANHPSSNDAE EQFKQNVVNE AKRYLQETIL RLQAIPYHLQ VGQAWTSESE 120
121 RELEKKKEQV EKKQEELMQT RIVLEEQVFL VENMIEDAKA KRKFSEVETL LSSLAPLHEE 180
181 IHSITEKIHD LDLFDI
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
