| Protein: | TAF10 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 206 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TAF10.
| Description | E-value | Query Range |
Subject Range |
|
|
4.0E-68 | [1..206] | [1..206] |
|
|
5.0E-49 | [21..205] | [11..166] |
|
|
2.0E-40 | [74..205] | [116..218] |
|
|
2.0E-40 | [74..205] | [116..217] |
|
|
7.0E-37 | [56..206] | [46..211] |
|
|
4.0E-36 | [8..206] | [19..215] |
|
|
2.0E-32 | [70..205] | [27..132] |
|
|
2.0E-30 | [71..205] | [15..119] |
|
Region A: Residues: [1-66] |
1 11 21 31 41 51
| | | | | |
1 MDFEEDYDAE FDDNQEGQLE TPFPSVAGAD DGDNDNDDSV AENMKKKQKR EAVVDDGSEN 60
61 AFGIPE
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.354 | d.50.1 | dsRNA-binding domain-like |
| View | Download | 0.312 | a.38.1 | Helix-loop-helix DNA-binding domain |
| View | Download | 0.234 | a.2.3 | Chaperone J-domain |
| View | Download | 0.284 | a.23.5 | Hemolysin expression modulating protein HHA |
| View | Download | 0.266 | a.5.4 | Elongation factor TFIIS domain 2 |
| View | Download | 0.220 | a.64.1 | Saposin |
| View | Download | 0.217 | a.69.3 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain |
| View | Download | 0.214 | a.108.1 | Ribosomal protein L7/12, oligomerisation (N-terminal) domain |
| View | Download | 0.210 | a.64.1 | Saposin |
| View | Download | 0.209 | f.13.1 | Family A G protein-coupled receptor-like |
| View | Download | 0.209 | a.48.3 | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |
| Term | Confidence | Notes |
| general RNA polymerase II transcription factor activity | 8.88482968293417 | bayes_pls_golite062009 |
| lysine N-acetyltransferase activity | 5.93249134612505 | bayes_pls_golite062009 |
| histone acetyltransferase activity | 5.93249134612505 | bayes_pls_golite062009 |
| N-acetyltransferase activity | 4.49084162254966 | bayes_pls_golite062009 |
| DNA binding | 4.24660531286828 | bayes_pls_golite062009 |
| N-acyltransferase activity | 4.2172829451557 | bayes_pls_golite062009 |
| nucleic acid binding | 4.14026521609645 | bayes_pls_golite062009 |
| transcription regulator activity | 3.91807454227165 | bayes_pls_golite062009 |
| acetyltransferase activity | 3.91533222675137 | bayes_pls_golite062009 |
| transcription initiation factor activity | 3.78067108255869 | bayes_pls_golite062009 |
| acyltransferase activity | 3.38996237245502 | bayes_pls_golite062009 |
| transferase activity, transferring acyl groups other than amino-acyl groups | 3.35419529667223 | bayes_pls_golite062009 |
| transferase activity, transferring acyl groups | 3.18312128320637 | bayes_pls_golite062009 |
| binding | 3.14832737946099 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 3.02428691626433 | bayes_pls_golite062009 |
| transcription factor activity | 2.39322722597434 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 1.83714729861923 | bayes_pls_golite062009 |
| transcription activator activity | 1.12739348005764 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 1.03060091158028 | bayes_pls_golite062009 |
| protein binding | 1.01897642648285 | bayes_pls_golite062009 |
| transcription factor binding | 1.01773884290535 | bayes_pls_golite062009 |
| transcription coactivator activity | 0.976797801726735 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.840442755533537 | bayes_pls_golite062009 |
| transcription repressor activity | 0.621482805601238 | bayes_pls_golite062009 |
| histone binding | 0.184823910505751 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.0585868733603467 | bayes_pls_golite062009 |
|
Region A: Residues: [67-206] |
1 11 21 31 41 51
| | | | | |
1 FTRKDKTLEE ILEMMDSTPP IIPDAVIDYY LTKNGFNVAD VRVKRLLALA TQKFVSDIAK 60
61 DAYEYSRIRS SVAVSNANNS QARARQLLQG QQQPGVQQIS QQQHQQNEKT TASKVVLTVN 120
121 DLSSAVAEYG LNIGRPDFYR
|
| Detection Method: | |
| Confidence: | 36.619789 |
| Match: | PF03540 |
| Description: | Transcription initiation factor TFIID 23-30kDa subunit |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
