| Protein: | SWF1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 336 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SWF1.
| Description | E-value | Query Range |
Subject Range |
|
|
7.0E-66 | [1..336] | [1..336] |
|
|
2.0E-51 | [9..289] | [3..299] |
|
|
3.0E-49 | [39..289] | [1..256] |
|
|
3.0E-47 | [3..303] | [297..614] |
|
|
6.0E-45 | [11..277] | [45..293] |
|
Region A: Residues: [1-118] |
1 11 21 31 41 51
| | | | | |
1 MSWNLLFVLL IGFVVLILLS PVFKSTWPFS TFYRNVFQPF LVDDQKYRWK LHLVPLFYTS 60
61 IYLYLVYTYH MRVESTIKNE LFLLERILIV PIIILPPVAL GILAMVSRAE DSKDHKSG
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.860 | a.7.1 | Spectrin repeat |
|
Region A: Residues: [119-206] |
1 11 21 31 41 51
| | | | | |
1 STEEYPYDYL LYYPAIKCST CRIVKPARSK HCSICNRCVL VADHHCIWIN NCIGKGNYLQ 60
61 FYLFLISNIF SMCYAFLRLW YISLNSTS
|
| Detection Method: | |
| Confidence: | 34.920819 |
| Match: | PF01529 |
| Description: | DHHC zinc finger domain |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
| Term | Confidence | Notes |
| histone acetyltransferase activity | 2.27787208911046 | bayes_pls_golite062009 |
| lysine N-acetyltransferase activity | 2.27787208911046 | bayes_pls_golite062009 |
| binding | 2.26426010117912 | bayes_pls_golite062009 |
| protein transporter activity | 1.41828558915713 | bayes_pls_golite062009 |
| protein binding | 1.35218914294914 | bayes_pls_golite062009 |
| transporter activity | 1.33264421804057 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 1.33198351552985 | bayes_pls_golite062009 |
| phosphoinositide binding | 1.19034196920111 | bayes_pls_golite062009 |
| phospholipid binding | 1.09010543599677 | bayes_pls_golite062009 |
| transcription regulator activity | 1.00368169716135 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.929797787738847 | bayes_pls_golite062009 |
| DNA binding | 0.919146751776512 | bayes_pls_golite062009 |
| nucleic acid binding | 0.788911508084267 | bayes_pls_golite062009 |
| N-acyltransferase activity | 0.565596821175093 | bayes_pls_golite062009 |
| N-acetyltransferase activity | 0.514633973697725 | bayes_pls_golite062009 |
| histone binding | 0.335672312059968 | bayes_pls_golite062009 |
| 0.308979985902751 | bayes_pls_golite062009 | |
| phosphatidylinositol binding | 0.251953910109229 | bayes_pls_golite062009 |
| ligase activity | 0.161281682592326 | bayes_pls_golite062009 |
| transcription factor activity | 0.0724499929149738 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.0446344906851331 | bayes_pls_golite062009 |
| pyrophosphatase activity | 0.00643795263722946 | bayes_pls_golite062009 |
|
Region A: Residues: [207-336] |
1 11 21 31 41 51
| | | | | |
1 TLPRAVLTLT ILCGCFTIIC AIFTYLQLAI VKEGMTTNEQ DKWYTIQEYM REGKLVRSLD 60
61 DDCPSWFFKC TEQKDDAAEP LQDQHVTFYS TNAYDHKHYN LTHYITIKDA SEIPNIYDKG 120
121 TFLANLTDLI
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
