| Protein: | INO2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 304 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for INO2.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..304] | [1..304] |
|
Region A: Residues: [1-214] |
1 11 21 31 41 51
| | | | | |
1 MQQATGNELL GILDLDNDID FETAYQMLSS NFDDQMSAHI HENTFSATSP PLLTHELGII 60
61 PNVATVQPSH VETIPADNQT HHAPLHTHAH YLNHNPHQPS MGFDQALGLK LSPSSSGLLS 120
121 TNESNAIEQF LDNLISQDMM SSNASMNSES HLHIRSPKKQ HRYTELNQRY PETHPHSNTG 180
181 ELPTNTADVP TEFTTREGPH QPIGNDHYNP PPFS
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [215-304] |
1 11 21 31 41 51
| | | | | |
1 VPEIRIPDSD IPANIEDDPV KVRKWKHVQM EKIRRINTKE AFERLIKSVR TPPKENGKRI 60
61 PKHILLTCVM NDIKSIRSAN EALQHILDDS
|
| Detection Method: | |
| Confidence: | 2.522879 |
| Match: | PF00010 |
| Description: | Helix-loop-helix DNA-binding domain |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
| Term | Confidence | Notes |
| transcription regulator activity | 5.08855036296174 | bayes_pls_golite062009 |
| DNA binding | 4.87243318281876 | bayes_pls_golite062009 |
| nucleic acid binding | 4.77537175825177 | bayes_pls_golite062009 |
| transcription factor activity | 4.43134840465732 | bayes_pls_golite062009 |
| binding | 3.63719401349018 | bayes_pls_golite062009 |
| transcription activator activity | 3.62180682771335 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 3.17029130860224 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 3.11931609869373 | bayes_pls_golite062009 |
| protein binding | 2.53793947976093 | bayes_pls_golite062009 |
| transcription factor binding | 2.33137487648005 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity, enhancer binding | 2.01283700957804 | bayes_pls_golite062009 |
| transcription cofactor activity | 1.30186253699056 | bayes_pls_golite062009 |
| transcription repressor activity | 0.828519845330998 | bayes_pls_golite062009 |
| transcription corepressor activity | 0.560586077390024 | bayes_pls_golite062009 |
| promoter binding | 0.531949034115114 | bayes_pls_golite062009 |
| protein heterodimerization activity | 0.328788240668351 | bayes_pls_golite062009 |
| transcription coactivator activity | 0.172100901723138 | bayes_pls_golite062009 |
| protein dimerization activity | 0.0815596840205237 | bayes_pls_golite062009 |
