| Protein: | STN1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 494 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for STN1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..494] | [1..494] |
|
Region A: Residues: [1-494] |
1 11 21 31 41 51
| | | | | |
1 MDKYGHIAHQ EGDVCYYIPR LFKYNSYYSG TEDVRIFVGD LKYRMRVSLQ ICEKYYDRRL 60
61 SMLFWKNHPL QQIHLIGCII GLQFKWIGKQ EYIFFQLDDC TSDSSLVGYT SDMRFLTCKV 120
121 KKDSILSWGL NITDLIGLTL HVYGQASLNY QELQVEYLRL CYSLTEEIDH WKITMNMREQ 180
181 LDTPWSLSDF VIGELFTQEQ EWTPETSQIE VVNPDFVGIG YKTPESKRNE TTFIEQLQEE 240
241 RLKDELEIIS PYNSTDTSNS VHSLSFRFVS SLKDFPETHF LNSGDQIDNG NDEQLKKLEY 300
301 QSANLPVMIP NRTSAKSNLM LILLGLQMKE ISNSDLYKLK EVRSVVTSLA SFLFQQQNVG 360
361 VMKSFDSLEK EAFRDLVNRL VSQGLIGLKD KTSETFDLLP LKNLFEYAEK RISVLMKLQC 420
421 YTGTVQLSHV QEKLHLPYIT TNGIVDVFKE CLKRTKKQYP EVLKNWWIDL DPKNGMEDQN 480
481 SGILLHLEYA AAYS
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
| Term | Confidence | Notes |
| telomerase inhibitor activity | 7.4045795951838 | bayes_pls_golite062009 |
| telomeric DNA binding | 6.80354805962079 | bayes_pls_golite062009 |
| single-stranded telomeric DNA binding | 6.768584842828 | bayes_pls_golite062009 |
| nucleic acid binding | 3.7851057288689 | bayes_pls_golite062009 |
| DNA binding | 3.36845392994723 | bayes_pls_golite062009 |
| DEAD/H-box RNA helicase binding | 3.18920599157105 | bayes_pls_golite062009 |
| binding | 2.75191943661749 | bayes_pls_golite062009 |
| structure-specific DNA binding | 2.74795067107907 | bayes_pls_golite062009 |
| single-stranded DNA binding | 2.64392934015868 | bayes_pls_golite062009 |
| structural constituent of ribosome | 1.93610624899943 | bayes_pls_golite062009 |
| transcription regulator activity | 1.87401014198878 | bayes_pls_golite062009 |
| structural molecule activity | 1.75354740531381 | bayes_pls_golite062009 |
| transcription repressor activity | 1.11970004248085 | bayes_pls_golite062009 |
| DNA helicase activity | 1.03434608237928 | bayes_pls_golite062009 |
| transcription factor activity | 0.967319786833633 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.753061173202428 | bayes_pls_golite062009 |
| DNA-dependent ATPase activity | 0.633347054314125 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 0.451086694866543 | bayes_pls_golite062009 |
| nuclease activity | 0.344602655860014 | bayes_pls_golite062009 |
| ribonuclease activity | 0.327087435405429 | bayes_pls_golite062009 |
| translation regulator activity | 0.272395932340767 | bayes_pls_golite062009 |
| translation factor activity, nucleic acid binding | 0.224702431869342 | bayes_pls_golite062009 |
| protein binding | 0.185497104009134 | bayes_pls_golite062009 |
| exonuclease activity | 0.123437412322173 | bayes_pls_golite062009 |
|
Region A: Residues: [311-494] |
1 11 21 31 41 51
| | | | | |
1 NRTSAKSNLM LILLGLQMKE ISNSDLYKLK EVRSVVTSLA SFLFQQQNVG VMKSFDSLEK 60
61 EAFRDLVNRL VSQGLIGLKD KTSETFDLLP LKNLFEYAEK RISVLMKLQC YTGTVQLSHV 120
121 QEKLHLPYIT TNGIVDVFKE CLKRTKKQYP EVLKNWWIDL DPKNGMEDQN SGILLHLEYA 180
181 AAYS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
