| Protein: | KRS1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 591 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for KRS1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..591] | [1..591] |
|
|
0.0 | [9..585] | [1..580] |
|
|
0.0 | [8..585] | [4..586] |
|
|
0.0 | [3..584] | [2..585] |
|
|
0.0 | [9..589] | [1..586] |
|
|
0.0 | [26..584] | [7..561] |
|
Region A: Residues: [1-220] |
1 11 21 31 41 51
| | | | | |
1 MSQQDNVKAA AEGVANLHLD EATGEMVSKS ELKKRIKQRQ VEAKKAAKKA AAQPKPASKK 60
61 KTDLFADLDP SQYFETRSRQ IQELRKTHEP NPYPHKFHVS ISNPEFLAKY AHLKKGETLP 120
121 EEKVSIAGRI HAKRESGSKL KFYVLHGDGV EVQLMSQLQD YCDPDSYEKD HDLLKRGDIV 180
181 GVEGYVGRTQ PKKGGEGEVS VFVSRVQLLT PCLHMLPADH
|
| Detection Method: |  |
| Confidence: | 1121.0103 |
| Match: | 1e1oA_ |
| Description: | Lysyl-tRNA synthetase (LysRS) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ligase activity, forming aminoacyl-tRNA and related compounds | 7.89468709683036 | bayes_pls_golite062009 |
| ligase activity, forming carbon-oxygen bonds | 7.89468709683036 | bayes_pls_golite062009 |
| aminoacyl-tRNA ligase activity | 7.88410036819636 | bayes_pls_golite062009 |
| ligase activity | 6.92073480193262 | bayes_pls_golite062009 |
| lysine-tRNA ligase activity | 5.79033103181143 | bayes_pls_golite062009 |
| aspartate-tRNA ligase activity | 3.80084837437429 | bayes_pls_golite062009 |
| phenylalanine-tRNA ligase activity | 2.99105702052936 | bayes_pls_golite062009 |
| serine-tRNA ligase activity | 2.46505535069103 | bayes_pls_golite062009 |
| structural constituent of ribosome | 2.43759174701552 | bayes_pls_golite062009 |
| glycine-tRNA ligase activity | 2.29229136935761 | bayes_pls_golite062009 |
| threonine-tRNA ligase activity | 2.18642354927 | bayes_pls_golite062009 |
| structural molecule activity | 2.08258913217268 | bayes_pls_golite062009 |
| catalytic activity | 1.99372273395202 | bayes_pls_golite062009 |
| alanine-tRNA ligase activity | 1.82594054955281 | bayes_pls_golite062009 |
| histidine-tRNA ligase activity | 1.72215103383322 | bayes_pls_golite062009 |
| transcription regulator activity | 1.67362693618722 | bayes_pls_golite062009 |
| binding | 1.54403712698597 | bayes_pls_golite062009 |
| nucleic acid binding | 1.48056625237411 | bayes_pls_golite062009 |
| DNA binding | 1.44496421928708 | bayes_pls_golite062009 |
| translation initiation factor activity | 0.96756670903925 | bayes_pls_golite062009 |
| asparagine-tRNA ligase activity | 0.921492123574877 | bayes_pls_golite062009 |
| transcription factor activity | 0.825973629967327 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.77755643935497 | bayes_pls_golite062009 |
| ribonuclease activity | 0.702449673647117 | bayes_pls_golite062009 |
| nuclease activity | 0.111225677144242 | bayes_pls_golite062009 |
|
Region A: Residues: [221-591] |
1 11 21 31 41 51
| | | | | |
1 FGFKDQETRY RKRYLDLIMN KDARNRFITR SEIIRYIRRF LDQRKFIEVE TPMMNVIAGG 60
61 ATAKPFITHH NDLDMDMYMR IAPELFLKQL VVGGLDRVYE IGRQFRNEGI DMTHNPEFTT 120
121 CEFYQAYADV YDLMDMTELM FSEMVKEITG SYIIKYHPDP ADPAKELELN FSRPWKRINM 180
181 IEELEKVFNV KFPSGDQLHT AETGEFLKKI LVDNKLECPP PLTNARMLDK LVGELEDTCI 240
241 NPTFIFGHPQ MMSPLAKYSR DQPGLCERFE VFVATKEICN AYTELNDPFD QRARFEEQAR 300
301 QKDQGDDEAQ LVDETFCNAL EYGLPPTGGW GCGIDRLAMF LTDSNTIREV LLFPTLKPDV 360
361 LREEVKKEEE N
|
| Detection Method: | |
| Confidence: | 1121.0103 |
| Match: | 1e1oA_ |
| Description: | Lysyl-tRNA synthetase (LysRS) |
| Matching Structure (courtesy of the PDB): |
|
