| Protein: | RDI1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 202 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RDI1.
| Description | E-value | Query Range |
Subject Range |
|
|
2.0E-80 | [1..202] | [16..216] |
|
|
2.0E-80 | [1..202] | [1..201] |
|
|
5.0E-79 | [1..202] | [1..201] |
|
|
1.0E-70 | [1..202] | [1..202] |
|
Region A: Residues: [1-202] |
1 11 21 31 41 51
| | | | | |
1 MAEESTDFSQ FEEERNNDQY KVSAKKTVDE YKNLDAEDES LAKWKESLGL SSDVLPLEFP 60
61 GDKRKVVVQK IQLLVNTEPN PITFDLTNEK TIKELASKRY KIKENSIYKL KIVFKVQHEI 120
121 ITGLRYVQYI KKAGIAVDKI DDHLGSYAPN TKTKPFYEVE LPESEAPSGF LARGNYSAVS 180
181 KFIDDDKTNH LTLNWGVEIV KK
|
| Detection Method: |  |
| Confidence: | 376.450636 |
| Match: | 1doaB_ |
| Description: | Rho GDP-dissociation inhibitor 1, RhoGDI |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| actin binding | 4.21900602727099 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 3.82728537491772 | bayes_pls_golite062009 |
| voltage-gated cation channel activity | 2.79599274364249 | bayes_pls_golite062009 |
| voltage-gated ion channel activity | 2.7120102542099 | bayes_pls_golite062009 |
| voltage-gated channel activity | 2.70863932585459 | bayes_pls_golite062009 |
| potassium channel activity | 2.69685666968196 | bayes_pls_golite062009 |
| voltage-gated potassium channel activity | 2.69627305312298 | bayes_pls_golite062009 |
| binding | 2.65544526722793 | bayes_pls_golite062009 |
| cation channel activity | 2.65302958856525 | bayes_pls_golite062009 |
| gated channel activity | 2.52278796517374 | bayes_pls_golite062009 |
| transporter activity | 2.46466249895824 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 2.37642404692102 | bayes_pls_golite062009 |
| transmembrane transporter activity | 2.37262306131842 | bayes_pls_golite062009 |
| substrate-specific channel activity | 2.32502571419352 | bayes_pls_golite062009 |
| channel activity | 2.3181005726144 | bayes_pls_golite062009 |
| passive transmembrane transporter activity | 2.3181005726144 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 2.31677709260544 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 2.28077016868353 | bayes_pls_golite062009 |
| ion channel activity | 2.2553711462771 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 2.23522391314947 | bayes_pls_golite062009 |
| metal ion transmembrane transporter activity | 2.15379228421204 | bayes_pls_golite062009 |
| inward rectifier potassium channel activity | 1.86598930407084 | bayes_pls_golite062009 |
| ligand-gated ion channel activity | 1.81486809950722 | bayes_pls_golite062009 |
| ligand-gated channel activity | 1.81486809950722 | bayes_pls_golite062009 |
| Rho GDP-dissociation inhibitor activity | 1.67374100547551 | bayes_pls_golite062009 |
| actin filament binding | 1.67203076960313 | bayes_pls_golite062009 |
| small GTPase regulator activity | 1.55727555528218 | bayes_pls_golite062009 |
| protein binding | 1.50286160643298 | bayes_pls_golite062009 |
| GTPase regulator activity | 1.44225801859996 | bayes_pls_golite062009 |
| nucleoside-triphosphatase regulator activity | 1.42486878565247 | bayes_pls_golite062009 |
| clathrin binding | 1.23902179002817 | bayes_pls_golite062009 |
| molecular transducer activity | 1.12993648323166 | bayes_pls_golite062009 |
| signal transducer activity | 1.12993648323166 | bayes_pls_golite062009 |
| enzyme regulator activity | 1.05880190577068 | bayes_pls_golite062009 |
| GDP-dissociation inhibitor activity | 0.580608094701522 | bayes_pls_golite062009 |
