| Protein: | PMT1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 817 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PMT1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..817] | [1..817] |
|
|
0.0 | [14..769] | [31..789] |
|
|
0.0 | [12..727] | [30..736] |
|
|
0.0 | [14..727] | [18..744] |
|
|
0.0 | [30..727] | [43..737] |
|
|
0.0 | [38..774] | [22..763] |
|
|
0.0 | [20..729] | [144..877] |
|
|
0.0 | [24..729] | [22..750] |
|
Region A: Residues: [1-319] |
1 11 21 31 41 51
| | | | | |
1 MSEEKTYKRV EQDDPVPELD IKQGPVRPFI VTDPSAELAS LRTMVTLKEK LLVACLAVFT 60
61 AVIRLHGLAW PDSVVFDEVH FGGFASQYIR GTYFMDVHPP LAKMLYAGVA SLGGFQGDFD 120
121 FENIGDSFPS TTPYVLMRFF SASLGALTVI LMYMTLRYSG VRMWVALMSA ICFAVENSYV 180
181 TISRYILLDA PLMFFIAAAV YSFKKYEMYP ANSLNAYKSL LATGIALGMA SSSKWVGLFT 240
241 VTWVGLLCIW RLWFMIGDLT KSSKSIFKVA FAKLAFLLGV PFALYLVFFY IHFQSLTLDG 300
301 DGASFFSPEF RSTLKNNKI
|
| Detection Method: |  |
| Confidence: | 100.619789 |
| Match: | PF02366 |
| Description: | Dolichyl-phosphate-mannose-protein mannosyltransferase |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [320-384] |
1 11 21 31 41 51
| | | | | |
1 PQNVVADVGI GSIISLRHLS TMGGYLHSHS HNYPAGSEQQ QSTLYPHMDA NNDWLLELYN 60
61 APGES
|
| Detection Method: | |
| Confidence: | 16.0 |
| Match: | PF02815 |
| Description: | MIR domain |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [385-457] |
1 11 21 31 41 51
| | | | | |
1 LTTFQNLTDG TKVRLFHTVT RCRLHSHDHK PPVSESSDWQ KEVSCYGYSG FDGDANDDWV 60
61 VEIDKKNSAP GVA
|
| Detection Method: | |
| Confidence: | 19.823909 |
| Match: | PF02815 |
| Description: | MIR domain |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
| Term | Confidence | Notes |
| dolichyl-phosphate-mannose-protein mannosyltransferase activity | 7.33543412640964 | bayes_pls_golite062009 |
| mannosyltransferase activity | 6.32966341675541 | bayes_pls_golite062009 |
| transferase activity, transferring hexosyl groups | 2.60661923349025 | bayes_pls_golite062009 |
| transferase activity, transferring glycosyl groups | 2.57555885876017 | bayes_pls_golite062009 |
| receptor activity | 1.99332745476324 | bayes_pls_golite062009 |
| binding | 1.86366637427031 | bayes_pls_golite062009 |
| molecular transducer activity | 1.71523634580131 | bayes_pls_golite062009 |
| signal transducer activity | 1.71523634580131 | bayes_pls_golite062009 |
| cation channel activity | 1.66500687404195 | bayes_pls_golite062009 |
| ion channel activity | 1.61859406934521 | bayes_pls_golite062009 |
| substrate-specific channel activity | 1.57127083095499 | bayes_pls_golite062009 |
| passive transmembrane transporter activity | 1.55374970486978 | bayes_pls_golite062009 |
| channel activity | 1.55374970486978 | bayes_pls_golite062009 |
| inositol-1,4,5-trisphosphate receptor activity | 1.28298370923705 | bayes_pls_golite062009 |
| transferase activity | 0.981084601370981 | bayes_pls_golite062009 |
| calcium channel activity | 0.85901349040585 | bayes_pls_golite062009 |
| catalytic activity | 0.659936859803906 | bayes_pls_golite062009 |
| calcium-release channel activity | 0.65133561512386 | bayes_pls_golite062009 |
| gated channel activity | 0.53737429019655 | bayes_pls_golite062009 |
| ligand-gated ion channel activity | 0.52162184692236 | bayes_pls_golite062009 |
| ligand-gated channel activity | 0.52162184692236 | bayes_pls_golite062009 |
| protein binding | 0.405144403982597 | bayes_pls_golite062009 |
| inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity | 0.152598505509111 | bayes_pls_golite062009 |
|
Region A: Residues: [458-547] |
1 11 21 31 41 51
| | | | | |
1 QERVIALDTK FRLRHAMTGC YLFSHEVKLP AWGFEQQEVT CASSGRHDLT LWYVENNSNP 60
61 LLPEDTKRIS YKPASFISKF IESHKKMWHI
|
| Detection Method: | |
| Confidence: | 19.508638 |
| Match: | PF02815 |
| Description: | MIR domain |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [548-602] |
1 11 21 31 41 51
| | | | | |
1 NKNLVEPHVY ESQPTSWPFL LRGISYWGEN NRNVYLLGNA IVWWAVTAFI GIFGL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.960 | a.7.2 | Enzyme IIa from lactose specific PTS, IIa-lac |
|
Region A: Residues: [603-743] |
1 11 21 31 41 51
| | | | | |
1 IVITELFSWQ LGKPILKDSK VVNFHVQVIH YLLGFAVHYA PSFLMQRQMF LHHYLPAYYF 60
61 GILALGHALD IIVSYVFRSK RQMGYAVVIT FLAASVYFFK SFSPIIYGTP WTQELCQKSQ 120
121 WLSGWDYNCN TYFSSLEEYK N
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [744-817] |
1 11 21 31 41 51
| | | | | |
1 QTLTKRESQP AATSTVEEIT IEGDGPSYED LMNEDGKKIF KDTEGNELDP EVVKKMLEEE 60
61 GANILKVEKR AVLE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
