| Protein: | PMT1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 817 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PMT1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..817] | [1..817] |
|
|
0.0 | [14..769] | [31..789] |
|
|
0.0 | [12..727] | [30..736] |
|
|
0.0 | [14..727] | [18..744] |
|
|
0.0 | [30..727] | [43..737] |
|
|
0.0 | [38..774] | [22..763] |
|
|
0.0 | [20..729] | [144..877] |
|
|
0.0 | [24..729] | [22..750] |
|
Region A: Residues: [1-319] |
1 11 21 31 41 51
| | | | | |
1 MSEEKTYKRV EQDDPVPELD IKQGPVRPFI VTDPSAELAS LRTMVTLKEK LLVACLAVFT 60
61 AVIRLHGLAW PDSVVFDEVH FGGFASQYIR GTYFMDVHPP LAKMLYAGVA SLGGFQGDFD 120
121 FENIGDSFPS TTPYVLMRFF SASLGALTVI LMYMTLRYSG VRMWVALMSA ICFAVENSYV 180
181 TISRYILLDA PLMFFIAAAV YSFKKYEMYP ANSLNAYKSL LATGIALGMA SSSKWVGLFT 240
241 VTWVGLLCIW RLWFMIGDLT KSSKSIFKVA FAKLAFLLGV PFALYLVFFY IHFQSLTLDG 300
301 DGASFFSPEF RSTLKNNKI
|
| Detection Method: |  |
| Confidence: | 100.619789 |
| Match: | PF02366 |
| Description: | Dolichyl-phosphate-mannose-protein mannosyltransferase |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [320-384] |
1 11 21 31 41 51
| | | | | |
1 PQNVVADVGI GSIISLRHLS TMGGYLHSHS HNYPAGSEQQ QSTLYPHMDA NNDWLLELYN 60
61 APGES
|
| Detection Method: | |
| Confidence: | 16.0 |
| Match: | PF02815 |
| Description: | MIR domain |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [385-457] |
1 11 21 31 41 51
| | | | | |
1 LTTFQNLTDG TKVRLFHTVT RCRLHSHDHK PPVSESSDWQ KEVSCYGYSG FDGDANDDWV 60
61 VEIDKKNSAP GVA
|
| Detection Method: | |
| Confidence: | 19.823909 |
| Match: | PF02815 |
| Description: | MIR domain |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
| Term | Confidence | Notes |
| dolichyl-phosphate-mannose-protein mannosyltransferase activity | 7.33543412640964 | bayes_pls_golite062009 |
| mannosyltransferase activity | 6.32966341675541 | bayes_pls_golite062009 |
| transferase activity, transferring hexosyl groups | 2.60661923349025 | bayes_pls_golite062009 |
| transferase activity, transferring glycosyl groups | 2.57555885876017 | bayes_pls_golite062009 |
| receptor activity | 1.99332745476324 | bayes_pls_golite062009 |
| binding | 1.86366637427031 | bayes_pls_golite062009 |
| molecular transducer activity | 1.71523634580131 | bayes_pls_golite062009 |
| signal transducer activity | 1.71523634580131 | bayes_pls_golite062009 |
| cation channel activity | 1.66500687404195 | bayes_pls_golite062009 |
| ion channel activity | 1.61859406934521 | bayes_pls_golite062009 |
| substrate-specific channel activity | 1.57127083095499 | bayes_pls_golite062009 |
| passive transmembrane transporter activity | 1.55374970486978 | bayes_pls_golite062009 |
| channel activity | 1.55374970486978 | bayes_pls_golite062009 |
| inositol-1,4,5-trisphosphate receptor activity | 1.28298370923705 | bayes_pls_golite062009 |
| transferase activity | 0.981084601370981 | bayes_pls_golite062009 |
| calcium channel activity | 0.85901349040585 | bayes_pls_golite062009 |
| catalytic activity | 0.659936859803906 | bayes_pls_golite062009 |
| calcium-release channel activity | 0.65133561512386 | bayes_pls_golite062009 |
| gated channel activity | 0.53737429019655 | bayes_pls_golite062009 |
| ligand-gated ion channel activity | 0.52162184692236 | bayes_pls_golite062009 |
| ligand-gated channel activity | 0.52162184692236 | bayes_pls_golite062009 |
| protein binding | 0.405144403982597 | bayes_pls_golite062009 |
| inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity | 0.152598505509111 | bayes_pls_golite062009 |
|
Region A: Residues: [458-547] |
1 11 21 31 41 51
| | | | | |
1 QERVIALDTK FRLRHAMTGC YLFSHEVKLP AWGFEQQEVT CASSGRHDLT LWYVENNSNP 60
61 LLPEDTKRIS YKPASFISKF IESHKKMWHI
|
| Detection Method: | |
| Confidence: | 19.508638 |
| Match: | PF02815 |
| Description: | MIR domain |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.682 | N/A | N/A | a.50.1 | Anaphylotoxins (complement system) |
| View | Download | 0.668 | N/A | N/A | d.74.2 | C-terminal domain of arginine repressor |
| View | Download | 0.667 | N/A | N/A | d.58.38 | Urease metallochaperone UreE, C-terminal domain |
| View | Download | 0.645 | N/A | N/A | d.68.3 | SirA-like |
| View | Download | 0.636 | N/A | N/A | d.58.1 | 4Fe-4S ferredoxins |
|
Region A: Residues: [548-602] |
1 11 21 31 41 51
| | | | | |
1 NKNLVEPHVY ESQPTSWPFL LRGISYWGEN NRNVYLLGNA IVWWAVTAFI GIFGL
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.636 | d.58.1 | 4Fe-4S ferredoxins |
| View | Download | 0.645 | d.68.3 | SirA-like |
| View | Download | 0.668 | d.74.2 | C-terminal domain of arginine repressor |
| View | Download | 0.682 | a.50.1 | Anaphylotoxins (complement system) |
| View | Download | 0.960 | a.7.2 | Enzyme IIa from lactose specific PTS, IIa-lac |
| View | Download | 0.954 | a.47.2 | t-snare proteins |
| View | Download | 0.950 | f.1.3 | delta-Endotoxin (insectocide), N-terminal domain |
| View | Download | 0.919 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.896 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.667 | d.58.38 | Urease metallochaperone UreE, C-terminal domain |
| View | Download | 0.575 | d.58.23 | Probable ACP-binding domain of malonyl-CoA ACP transacylase |
| View | Download | 0.566 | a.60.2 | RuvA domain 2-like |
| View | Download | 0.551 | d.58.36 | Sulfite reductase, domains 1 and 3 |
| View | Download | 0.519 | d.51.1 | Eukaryotic type KH-domain (KH-domain type I) |
| View | Download | 0.477 | d.58.49 | YajQ-like |
| View | Download | 0.465 | a.4.1 | Homeodomain-like |
| View | Download | 0.463 | d.59.1 | Ribosomal protein L30p/L7e |
| View | Download | 0.459 | f.14.1 | Voltage-gated potassium channels |
| View | Download | 0.432 | d.68.3 | SirA-like |
| View | Download | 0.388 | a.4.8 | Ribosomal protein S18 |
| View | Download | 0.386 | d.58.49 | YajQ-like |
| View | Download | 0.369 | d.58.36 | Sulfite reductase, domains 1 and 3 |
| View | Download | 0.360 | g.3.11 | EGF/Laminin |
| View | Download | 0.353 | d.141.1 | Ribosomal protein L6 |
| View | Download | 0.352 | d.58.17 | Metal-binding domain |
| View | Download | 0.330 | d.58.25 | Killer toxin KP6 alpha-subunit |
| View | Download | 0.312 | d.58.17 | Metal-binding domain |
| View | Download | 0.311 | d.45.1 | ClpS-like |
| View | Download | 0.284 | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.283 | d.52.1 | Alpha-lytic protease prodomain |
| View | Download | 0.247 | d.58.5 | GlnB-like |
| View | Download | 0.237 | d.58.3 | Protease propeptides/inhibitors |
| View | Download | 0.222 | d.212.1 | TolA/TonB C-terminal domain |
| View | Download | 0.216 | d.75.1 | tRNA splicing endonuclease EdnA, N-terminal domain |
| View | Download | 0.213 | d.58.17 | Metal-binding domain |
| View | Download | 0.211 | d.58.17 | Metal-binding domain |
| View | Download | 0.208 | d.57.1 | DNA damage-inducible protein DinI |
| View | Download | 0.207 | d.51.1 | Eukaryotic type KH-domain (KH-domain type I) |
| View | Download | 0.206 | d.49.1 | Signal recognition particle alu RNA binding heterodimer, SRP9/14 |
| View | Download | 0.200 | g.7.1 | Snake toxin-like |
|
Region A: Residues: [603-743] |
1 11 21 31 41 51
| | | | | |
1 IVITELFSWQ LGKPILKDSK VVNFHVQVIH YLLGFAVHYA PSFLMQRQMF LHHYLPAYYF 60
61 GILALGHALD IIVSYVFRSK RQMGYAVVIT FLAASVYFFK SFSPIIYGTP WTQELCQKSQ 120
121 WLSGWDYNCN TYFSSLEEYK N
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.560 | N/A | N/A | d.58.11 | EF-G/eEF-2 domains III and V |
| View | Download | 0.545 | N/A | N/A | d.58.1 | 4Fe-4S ferredoxins |
| View | Download | 0.536 | N/A | N/A | d.64.1 | eIF1-like |
| View | Download | 0.505 | N/A | N/A | d.58.17 | Metal-binding domain |
| View | Download | 0.501 | N/A | N/A | d.58.24 | CheY-binding domain of CheA |
|
Region A: Residues: [744-817] |
1 11 21 31 41 51
| | | | | |
1 QTLTKRESQP AATSTVEEIT IEGDGPSYED LMNEDGKKIF KDTEGNELDP EVVKKMLEEE 60
61 GANILKVEKR AVLE
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.545 | d.58.1 | 4Fe-4S ferredoxins |
| View | Download | 0.505 | d.58.17 | Metal-binding domain |
| View | Download | 0.536 | d.64.1 | eIF1-like |
| View | Download | 0.501 | d.58.24 | CheY-binding domain of CheA |
| View | Download | 0.560 | d.58.11 | EF-G/eEF-2 domains III and V |
| View | Download | 0.470 | a.60.5 | Barrier-to-autointegration factor, BAF |
| View | Download | 0.453 | d.58.38 | Urease metallochaperone UreE, C-terminal domain |
| View | Download | 0.443 | d.68.3 | SirA-like |
| View | Download | 0.439 | d.58.12 | eEF-1beta-like |
| View | Download | 0.435 | a.4.1 | Homeodomain-like |
| View | Download | 0.426 | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
| View | Download | 0.424 | a.56.1 | CO dehydrogenase ISP C-domain like |
| View | Download | 0.414 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.381 | d.58.48 | MTH1187-like |
| View | Download | 0.380 | d.58.3 | Protease propeptides/inhibitors |
| View | Download | 0.372 | d.58.18 | Regulatory domain in the aminoacid metabolism |
| View | Download | 0.365 | a.60.12 | DNA polymerase beta-like, second domain |
| View | Download | 0.353 | d.58.10 | Acylphosphatase-like |
| View | Download | 0.350 | d.15.3 | MoaD/ThiS |
| View | Download | 0.347 | d.58.25 | Killer toxin KP6 alpha-subunit |
| View | Download | 0.333 | d.74.2 | C-terminal domain of arginine repressor |
| View | Download | 0.332 | a.163.1 | Crustacean CHH/MIH/GIH neurohormone |
| View | Download | 0.309 | d.58.4 | Dimeric alpha+beta barrel |
| View | Download | 0.305 | d.26.2 | Colicin E3 immunity protein |
| View | Download | 0.303 | a.60.11 | Hypothetical protein YjbJ |
| View | Download | 0.283 | a.4.1 | Homeodomain-like |
| View | Download | 0.282 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.256 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.252 | a.83.1 | Guanido kinase N-terminal domain |
| View | Download | 0.251 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.250 | d.82.1 | Copper amine oxidase, domain N |
| View | Download | 0.233 | a.4.1 | Homeodomain-like |
| View | Download | 0.229 | a.77.1 | DEATH domain |
| View | Download | 0.229 | d.96.1 | Tetrahydrobiopterin biosynthesis enzymes-like |
| View | Download | 0.201 | b.11.1 | gamma-Crystallin-like |
