| Protein: | EDS1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 919 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for EDS1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..919] | [1..919] |
|
|
3.0E-45 | [35..390] | [56..488] |
|
|
3.0E-44 | [3..335] | [61..428] |
|
|
6.0E-44 | [5..350] | [723..1075] |
|
|
9.0E-39 | [5..400] | [930..1308] |
|
|
1.0E-37 | [1..321] | [1..312] |
|
|
4.0E-36 | [14..321] | [7..312] |
|
Region A: Residues: [1-134] |
1 11 21 31 41 51
| | | | | |
1 MSHHVPNLYG TPIRDPHERK RNSASMGEVN QSVSSRNCER GSEKGTKQRK KASHACDQCR 60
61 RKRIKCRFDK HTGVCQGCLE VGEKCQFIRV PLKRGPAKKR GSVVSIEKFS SDNDPLQYRP 120
121 RTHSYPMNSG NNYL
|
| Detection Method: |  |
| Confidence: | 8.69897 |
| Match: | 1hwtC_ |
| Description: | Hap1 (Cyp1); HAP1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.625108569999163 | bayes_pls_golite062009 |
| nucleic acid binding | 0.297563906361978 | bayes_pls_golite062009 |
| DNA binding | 0.187456195219132 | bayes_pls_golite062009 |
| transcription regulator activity | 0.0382143741325586 | bayes_pls_golite062009 |
|
Region A: Residues: [135-221] |
1 11 21 31 41 51
| | | | | |
1 PSLARNSSFP SISSLFVPSI TAQSQQFVKV PYDDIKRRSS LAILGSDSSI STEFGGNYRL 60
61 DENLNVRQEG KDIVAKGMIT PVEEMGA
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [222-393] |
1 11 21 31 41 51
| | | | | |
1 CSSNVRRQGS QSLPIQEQRA SPYINPFISG RSRLSSLSYT SEATTSEGNT QGKNQCMLTP 60
61 NSVRSIEKER LNSLTAGFPN KKLGTDGRSD KWDKNSTWKP VYRSSNPSHP STEKNVSLNQ 120
121 EASAKPLMLG TYRQFDATSF YKVLGIYYNF FHINFPVIPI NKSKFTDMLD PE
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [394-447] |
1 11 21 31 41 51
| | | | | |
1 KPNVIDEIRQ INNEIIQCFK TALEVLVFCK IKQRRSSKST KSWSRDSLCD FQKG
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [448-807] |
1 11 21 31 41 51
| | | | | |
1 LYYIQNFNKC IADCFQSLIT IKPVLKQNSS VIPSRIKFIY FSTIIVLNFI LILAGEESSL 60
61 LLGPSVGVFN EFQAHKLFLP FQNTSPMLLL NSNEESGDEI LDYAVLFKRL YILLNILDTL 120
121 QSFRLGQPKL INLNFGSAIE TYFSDKTGHN QVVEKAPVAL DNILRNLKLG EFITYFVLNR 180
181 KSLQVNVPHH LLFTNQTDYG EFAVEKGEHD NIAGKFETLL KKKEILIRKL LNIEQKNDHI 240
241 LENCCNSDAE MKNIGELVCS MITLVSGILD SITNMNAENS VDLDSKPLPN AYFAQDSEEE 300
301 LMSPTQSITS NLASEENTRC TTKDLMGTVS IFMLPMVEEC YNIISLIGPI PTTLISLYIR 360
361
|
| Detection Method: | |
| Confidence: | 7.04 |
| Match: | 1b8fA |
| Description: | Histidine ammonia-lyase (HAL) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [808-919] |
1 11 21 31 41 51
| | | | | |
1 NGNMAKGIND RIMTLSTALN ELVQITALFN TLEPFRKNAH DRAKRYYVSA TSSTGCYESV 60
61 MKSMYSGKCA ASNASNVAPS EEENKKILKK FADIGWKLMD DSELGCCCCF FN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
