| Protein: | APN2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 520 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for APN2.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..520] | [1..520] |
|
|
0.0 | [16..519] | [1..514] |
|
|
3.0E-90 | [17..519] | [1..513] |
|
|
1.0E-87 | [17..496] | [1..458] |
|
|
1.0E-80 | [16..428] | [1..385] |
|
|
8.0E-77 | [19..480] | [15..366] |
|
|
2.0E-75 | [19..480] | [9..360] |
|
Region A: Residues: [1-376] |
1 11 21 31 41 51
| | | | | |
1 MSSSENTLLD GKSENTIRFL TFNVNGIRTF FHYQPFSQMN QSLRSVFDFF RADIITFQEL 60
61 KTEKLSISKW GRVDGFYSFI SIPQTRKGYS GVGCWIRIPE KNHPLYHALQ VVKAEEGITG 120
121 YLTIKNGKHS AISYRNDVNQ GIGGYDSLDP DLDEKSALEL DSEGRCVMVE LACGIVIISV 180
181 YCPANSNSSE EGEMFRLRFL KVLLRRVRNL DKIGKKIVLM GDVNVCRDLI DSADTLEQFS 240
241 IPITDPMGGT KLEAQYRDKA IQFIINPDTP HRRIFNQILA DSLLPDASKR GILIDTTRLI 300
301 QTRNRLKMYT VWNMLKNLRP SNYGSRIDFI LVSLKLERCI KAADILPDIL GSDHCPVYSD 360
361 LDILDDRIEP GTTQVP
|
| Detection Method: |  |
| Confidence: | 154.0103 |
| Match: | 1hd7A_ |
| Description: | DNA repair endonuclease Hap1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.43395324624057 | bayes_pls_golite062009 |
| nucleic acid binding | 0.848172443927544 | bayes_pls_golite062009 |
| DNA binding | 0.675136468766578 | bayes_pls_golite062009 |
| transcription regulator activity | 0.649299186442773 | bayes_pls_golite062009 |
| protein binding | 0.229377151617187 | bayes_pls_golite062009 |
| hydrolase activity | 0.178972542898413 | bayes_pls_golite062009 |
| catalytic activity | 0.0166038714828167 | bayes_pls_golite062009 |
|
Region A: Residues: [377-520] |
1 11 21 31 41 51
| | | | | |
1 IPKFEARYKY NLRNHNVLEM FAKKDTNKES NKQKYCVSKV MNTKKNSNIK NKSLDSFFQK 60
61 VNGEKDDRIK ESSEIPQQAK KRISTPKLNF KDVFGKPPLC RHGEESMLKT SKTSANPGRK 120
121 FWICKRSRGD SNNTESSCGF FQWV
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
| Term | Confidence | Notes |
| binding | 1.43395324624057 | bayes_pls_golite062009 |
| nucleic acid binding | 0.848172443927544 | bayes_pls_golite062009 |
| DNA binding | 0.675136468766578 | bayes_pls_golite062009 |
| transcription regulator activity | 0.649299186442773 | bayes_pls_golite062009 |
| protein binding | 0.229377151617187 | bayes_pls_golite062009 |
| hydrolase activity | 0.178972542898413 | bayes_pls_golite062009 |
| catalytic activity | 0.0166038714828167 | bayes_pls_golite062009 |
