| Protein: | CG11360-PA, FBpp... |
| Organism: | Drosophila melanogaster |
| Length: | 628 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG11360-PA, FBpp....
| Description | E-value | Query Range |
Subject Range |
|
|
278.0 | [0..1] | [628..30] |
|
Region A: Residues: [1-202] |
1 11 21 31 41 51
| | | | | |
1 MAAQVTPKIS TCINSKGSIQ KKNQAQHHDM SEQSKVNEST LPLSDDPRTL QLALELSLVG 60
61 FNDNQNCYAQ PAQPLPMPLS ARSDFEIGTI NSTLPIPSAP NCLLLPNAGA VSSEDRSKKS 120
121 QNMTECVPVP SSEHVAEIVG RQGCKIKALR AKTNTYIKTP VRGEEPVFVV TGRKEDVNKA 180
181 KREILSAADH FSLIRASRKP VS
|
| Detection Method: |  |
| Confidence: | 3.69897 |
| Match: | 1tuaA |
| Description: | Structural genomics, 1.5A crystal structure of a hypothetical protein APE0754 from Aeropyrum pernix |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| RNA binding | 5.18414740305744 | bayes_pls_golite062009 |
| nucleic acid binding | 4.78650555542715 | bayes_pls_golite062009 |
| mRNA binding | 3.82977088614136 | bayes_pls_golite062009 |
| binding | 3.45962790790935 | bayes_pls_golite062009 |
| transcription regulator activity | 2.28364833275102 | bayes_pls_golite062009 |
| DNA binding | 2.03207983673692 | bayes_pls_golite062009 |
| transcription factor activity | 1.30278154718684 | bayes_pls_golite062009 |
| protein binding | 1.16541072642796 | bayes_pls_golite062009 |
| 1.02980840568405 | bayes_pls_golite062009 | |
| poly-pyrimidine tract binding | 0.63404501189528 | bayes_pls_golite062009 |
| mRNA 3'-UTR binding | 0.489176583045793 | bayes_pls_golite062009 |
| transcription repressor activity | 0.392035003865213 | bayes_pls_golite062009 |
| transcription activator activity | 0.324382863054631 | bayes_pls_golite062009 |
| transcription factor binding | 0.254024117548226 | bayes_pls_golite062009 |
| catalytic activity | 0.113112541746059 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.0321875054165348 | bayes_pls_golite062009 |
|
Region A: Residues: [203-303] |
1 11 21 31 41 51
| | | | | |
1 DSQNNGMVGS TTSSGGGAVP RMSGPPCMPG QVTIQVRVPY RVVGLVVGPK GATIKHIQQE 60
61 TQTYIVTPSR EKEPIFEVTG LPDNVDTARK QIEAHIALRT G
|
| Detection Method: | |
| Confidence: | 8.30103 |
| Match: | 2dgrA |
| Description: | No description for 2dgrA was found. |
|
Region A: Residues: [304-385] |
1 11 21 31 41 51
| | | | | |
1 SGSGSGDAIT MQSSDSVDTK EYASLPSLTQ ILNDDLNSEI LSSIYKNSVP STQEYANNSM 60
61 KTVVNVSNSV KLVQGHHTGN CF
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [386-628] |
1 11 21 31 41 51
| | | | | |
1 QKSEFAEMEM TANITAADIL DKRLPGNEVS VPLAKANVAN IVFRTTSSKT LSFCPPTSTS 60
61 ASFHSNCNAN ILTRSCSSAS STTSTKSTNN SANTPPEILN IWKSISDSID VDEGIGDSPS 120
121 IWNQPANIIP TAHCSPTISI SPTDSLLGMG EHSANQQNLN HAKEPIMPNL PQKIKGIQVQ 180
181 SNADNFLTHR ECFVCNENTV TTALVPCGHN MFCMECANHI CLSMDAVCPV CNSIVYHAMR 240
241 ILG
|
| Detection Method: | |
| Confidence: | 11.30103 |
| Match: | 1fbvA |
| Description: | Cbl; N-terminal domain of cbl (N-cbl); CBL |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 3.12724619324809 | bayes_pls_golite062009 |
| protein binding | 2.14586566310919 | bayes_pls_golite062009 |
| nucleic acid binding | 2.09146786953566 | bayes_pls_golite062009 |
| transcription regulator activity | 2.06449122804353 | bayes_pls_golite062009 |
| DNA binding | 1.74278466000445 | bayes_pls_golite062009 |
| transcription factor activity | 1.29826570244834 | bayes_pls_golite062009 |
| molecular adaptor activity | 0.494024302340603 | bayes_pls_golite062009 |
| SH3/SH2 adaptor activity | 0.409062479526042 | bayes_pls_golite062009 |
| protein binding, bridging | 0.370788151516215 | bayes_pls_golite062009 |
| signal transducer activity | 0.150891693412241 | bayes_pls_golite062009 |
| molecular transducer activity | 0.150891693412241 | bayes_pls_golite062009 |
