| Protein: | krs-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 514 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for krs-1.
| Description | E-value | Query Range |
Subject Range |
|
|
493.0 | [0..1] | [498..17] |
|
Region A: Residues: [1-514] |
1 11 21 31 41 51
| | | | | |
1 MRVRMIEARR AAGDNPFPHK FNVTISLTDF ITKYTPLEKE QVVEEIVSVA GRIHSKRESG 60
61 SKLVFYDIHG EGTHIQIMAN AKFHTGDVDF VTLHDRIKRG DIVGFTGRAT RTKAGELSLI 120
121 PNEILQLTPC LHMLPHSHFG LKDKELRFRK RYLDLILNPR VKDNFVIRSK IITFLRRYLD 180
181 NLGFLEVETP IMNQIAGGAT AKPFITHHND LDMNLFLRVA PELYHKMLVV GGIDRVYEVG 240
241 RLFRNEGIDL THNPEFTTCE FYMAYADYED VIQLTEDLLS SMVMSIKGTY KIEYHPNGPN 300
301 TEPVYEVDFT PPFKRVHMYD GLAEKLGATL PDPSTLHTEE AREVFDKLCR DNNVDCSAPR 360
361 TTARLLDKLV GEYLESTFIS PTFLIGHPQI MSPLAKWHRS IPGLTERFEL FAVTREIANA 420
421 YTELNDPITQ RQRFEQQAKD KDAGDDEAQM IDETFCNALE YGLPPTGGWG MGIDRLSMIL 480
481 TDNNNIKEVL LFPAMRPEDG TEKKTDFDAP TTLA
|
| Detection Method: |  |
| Confidence: | 136.0 |
| Match: | 1bbuA |
| Description: | Lysyl-tRNA synthetase (LysRS) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| lysine-tRNA ligase activity | 11.0047124677093 | bayes_pls_golite062009 |
| ligase activity, forming aminoacyl-tRNA and related compounds | 7.89468709683036 | bayes_pls_golite062009 |
| ligase activity, forming carbon-oxygen bonds | 7.89468709683036 | bayes_pls_golite062009 |
| aminoacyl-tRNA ligase activity | 7.88410036819636 | bayes_pls_golite062009 |
| ligase activity | 6.92073480193262 | bayes_pls_golite062009 |
| asparagine-tRNA ligase activity | 5.29805946490109 | bayes_pls_golite062009 |
| aspartate-tRNA ligase activity | 3.80084837437429 | bayes_pls_golite062009 |
| phenylalanine-tRNA ligase activity | 3.4145644216516 | bayes_pls_golite062009 |
| structural constituent of ribosome | 2.90150581291897 | bayes_pls_golite062009 |
| glycine-tRNA ligase activity | 2.61548498770105 | bayes_pls_golite062009 |
| structural molecule activity | 2.54582212334303 | bayes_pls_golite062009 |
| proline-tRNA ligase activity | 2.52223115725965 | bayes_pls_golite062009 |
| serine-tRNA ligase activity | 2.46505535069103 | bayes_pls_golite062009 |
| threonine-tRNA ligase activity | 2.18642354927 | bayes_pls_golite062009 |
| catalytic activity | 1.99372273395202 | bayes_pls_golite062009 |
| alanine-tRNA ligase activity | 1.82594054955281 | bayes_pls_golite062009 |
| histidine-tRNA ligase activity | 1.72215103383322 | bayes_pls_golite062009 |
| transcription regulator activity | 1.67362693618722 | bayes_pls_golite062009 |
| binding | 1.54403712698597 | bayes_pls_golite062009 |
| nucleic acid binding | 1.48056625237411 | bayes_pls_golite062009 |
| DNA binding | 1.44496421928708 | bayes_pls_golite062009 |
| translation initiation factor activity | 1.27539679024898 | bayes_pls_golite062009 |
| transcription factor activity | 0.825973629967327 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.77755643935497 | bayes_pls_golite062009 |
| ribonuclease activity | 0.702449673647117 | bayes_pls_golite062009 |
| nuclease activity | 0.29926900436997 | bayes_pls_golite062009 |
