| Protein: | CH60B_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 585 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CH60B_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
636.0 | [0..33] | [572..2] |
|
Region A: Residues: [1-585] |
1 11 21 31 41 51
| | | | | |
1 MYRLVSNVAS KARIARKCTS QIGSRLNSTR NYAAKDIRFG VEARALMLRG VEDLADAVKV 60
61 TMGPKGRNVI IEQSWGAPKV TKDGVTVAKS IEFKDRIKNV GASLVKQVAN ATNDVAGDGT 120
121 TCATVLTRAI FTEGCKSVAA GMNAMDLRRG IKLAVDTVVT NLQSRARMIS TSEEIAQVGT 180
181 ISANGDREIG ELIAKAMETV GKEGVITIQD GKTLFNELEV VEGMKIDRGY ISPYFITNPK 240
241 TQKCELEDPL ILIHEKKISN INAMVKVLEL ALKKQRPLLI VAEDVESDAL ATLILNKLRA 300
301 NIKVCAVKAP GFGENRKANL HDLAALTGAQ VITEELGMNL DNIDLSMFGN CKKVTVSKDD 360
361 TVVLDGAGDK QAIGERCEQI RSMVEASTSD YDKEKLQERL AKLSGGVAVL KIGGASETEV 420
421 SEKKDRVTDA LNATKAAVEE GIVPGGGVAL LYASKELEKL STANFDQKIG VQIIQNALKT 480
481 PVYTIASNAG VEGAVVVGKL LEQDNPDLGY DAAKGEYVDM IKAGIIDPLK VIRTALVDAA 540
541 SVSSLLTTTE AVVTEIPTKE VASPGMGGGG MGGMGGMGGM GGMGF
|
| Detection Method: |  |
| Confidence: | 174.0 |
| Match: | 1iokA |
| Description: | GroEL, E domain; GroEL, A domain; GroEL, I domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| unfolded protein binding | 7.60116801069598 | bayes_pls_golite062009 |
| misfolded protein binding | 2.60932901317399 | bayes_pls_golite062009 |
| lipopolysaccharide binding | 2.08823822762317 | bayes_pls_golite062009 |
| binding | 2.07154556649829 | bayes_pls_golite062009 |
| hydrogen ion transmembrane transporter activity | 1.90846357786961 | bayes_pls_golite062009 |
| monovalent inorganic cation transmembrane transporter activity | 1.85422470116133 | bayes_pls_golite062009 |
| protein binding | 1.68543685258552 | bayes_pls_golite062009 |
| nucleic acid binding | 1.67284737458957 | bayes_pls_golite062009 |
| DNA binding | 1.53776996197958 | bayes_pls_golite062009 |
| transporter activity | 1.27879339110564 | bayes_pls_golite062009 |
| transmembrane transporter activity | 1.08697283907212 | bayes_pls_golite062009 |
| chaperone binding | 0.91200031047441 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.828920415160435 | bayes_pls_golite062009 |
| ATPase activity, coupled | 0.787685249362834 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.75018875403424 | bayes_pls_golite062009 |
| pyrophosphatase activity | 0.69634667457441 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 0.682843768728088 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 0.680378643689288 | bayes_pls_golite062009 |
| structure-specific DNA binding | 0.650832159017275 | bayes_pls_golite062009 |
| ATPase activity | 0.584574936611857 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.573106450426516 | bayes_pls_golite062009 |
| insulin binding | 0.54263404774246 | bayes_pls_golite062009 |
| single-stranded DNA binding | 0.44104272460881 | bayes_pls_golite062009 |
| catalytic activity | 0.424959044318554 | bayes_pls_golite062009 |
| cell surface binding | 0.326492680678891 | bayes_pls_golite062009 |
| peptide hormone binding | 0.280457039468896 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 0.280310103153739 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 0.275534581026027 | bayes_pls_golite062009 |
| primary active transmembrane transporter activity | 0.252704226951294 | bayes_pls_golite062009 |
| P-P-bond-hydrolysis-driven transmembrane transporter activity | 0.243984617084631 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | 0.205808843369749 | bayes_pls_golite062009 |
| ATPase activity, coupled to movement of substances | 0.202279803135899 | bayes_pls_golite062009 |
| ATPase activity, coupled to transmembrane movement of substances | 0.20198255686005 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 0.0778814959589007 | bayes_pls_golite062009 |
| hydrolase activity | 0.0491351110520448 | bayes_pls_golite062009 |
