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View Structure Prediction Details

Protein: NDOR1_ARATH
Organism: Arabidopsis thaliana
Length: 623 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NDOR1_ARATH.

Description E-value Query
Range		 Subject
Range
gi|6041790 - gi|6041790|gb|AAF02110.1|AC009755_3 putative NADPH-ferrihemoprotein reductase [Arabidopsis thaliana]
 503.0 [0..1] [623..1]

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Predicted Domain #1
Region A:
Residues: [1-623] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGEKQRKLLV LYASQTGNAL DAAERIGREA ERRGLPASVV STDEFDTSSL PHHEEAVVFV  60
   61 VSTTGQGDSP DSFKAFWRFL LQRNLGNYWL QQVRYAVFGL GDSGYQKYNF VAKKLDKRLS 120
  121 DLGATTIIEK GLGDDQHPSG YEGTLDPWML SLWRTLYQIN PKYFPKGPDV KIPQDEVIDK 180
  181 PKYRILFHKQ EKLEPKLLSD SDIIQRARGM SPGKLFKDKS KPDCFLKMTR NEVLTKAEST 240
  241 KDVRHFEFQF VSSTIEYEVG DVVELLPSQN SSVVDAFIER CGLDPESFIT VGPRETENSS 300
  301 FSEEMITQIP IKLKTFVELT MDVTSASPRR YFFEIMSFYA TAEHEKERLQ YFASPEGRDD 360
  361 LYNYNQKERR SILEVLEDFP SVQIPFDWLV QLVPPLKPRA FSISSSPLAH PAAVHLTVSI 420
  421 VSWITPYKRT RKGLCSSWLA SLAPEQEVNI PVWFHKGSLP APSQSLPLIL VGPGTGCAPF 480
  481 RGFIAERAVQ AQSSPVAPVM FFFGCRNKDT DFLYRDFWES HAREGGMLSE GKGGGFYTAF 540
  541 SRDQPKKVYV QHKIREMSKR VWDLLCDGAA VYVAGSSTKM PCDVMSAFED IVSEETGGGS 600
  601 KEVASRWLKA LEKTGRYNVE AWS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 135.0
Match: 1amoA
Description: NADPH-cytochrome p450 reductase; NADPH-cytochrome p450 reductase, N-terminal domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
sulfite reductase (NADPH) activity 8.084406223553 bayes_pls_golite062009
oxidoreductase activity, acting on sulfur group of donors, NAD or NADP as acceptor 4.30314846685644 bayes_pls_golite062009
oxidoreductase activity, acting on NADH or NADPH 4.19887641848781 bayes_pls_golite062009
oxidoreductase activity, acting on sulfur group of donors 4.06091555929351 bayes_pls_golite062009
NADH dehydrogenase (ubiquinone) activity 3.8525097290463 bayes_pls_golite062009
arginine binding 3.31453699236145 bayes_pls_golite062009
oxidoreductase activity, acting on NADH or NADPH, heme protein as acceptor 3.111558299994 bayes_pls_golite062009
NADH dehydrogenase activity 3.09973680094998 bayes_pls_golite062009
oxidoreductase activity 3.02740987944465 bayes_pls_golite062009
tetrahydrobiopterin binding 3.017442325411 bayes_pls_golite062009
NADH dehydrogenase (quinone) activity 3.01705400717654 bayes_pls_golite062009
oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor 2.84592668144284 bayes_pls_golite062009
FAD binding 2.07600122867642 bayes_pls_golite062009
transcription regulator activity 2.07119387257991 bayes_pls_golite062009
coenzyme binding 1.94345417147733 bayes_pls_golite062009
binding 1.76189957257133 bayes_pls_golite062009
nitric-oxide synthase activity 1.73361245661515 bayes_pls_golite062009
cytochrome-b5 reductase activity 1.5685421124725 bayes_pls_golite062009
ferredoxin-NADP+ reductase activity 1.46342400843015 bayes_pls_golite062009
ferredoxin reductase activity 1.46342400843015 bayes_pls_golite062009
oxidoreductase activity, acting on iron-sulfur proteins as donors, NAD or NADP as acceptor 1.46342400843015 bayes_pls_golite062009
catalytic activity 1.45374095556065 bayes_pls_golite062009
phosphoric diester hydrolase activity 1.30413377266725 bayes_pls_golite062009
monooxygenase activity 1.24895114339483 bayes_pls_golite062009
NADP or NADPH binding 1.18833847639357 bayes_pls_golite062009
demethylase activity 1.1768217851058 bayes_pls_golite062009
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen 1.11231803143399 bayes_pls_golite062009
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen 0.878188072733981 bayes_pls_golite062009
transferase activity 0.708491789248912 bayes_pls_golite062009
FMN binding 0.649158247260553 bayes_pls_golite062009
NAD(P)H oxidase activity 0.46219666758416 bayes_pls_golite062009
riboflavin synthase activity 0.380537461428523 bayes_pls_golite062009
protein binding 0.244726474314668 bayes_pls_golite062009
cofactor binding 0.205324283520452 bayes_pls_golite062009
transcription factor binding 0.065157440608373 bayes_pls_golite062009
cytoskeletal protein binding 0.0373671593900911 bayes_pls_golite062009
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle