| Protein: | HGNC:9210|MIM:17... |
| Organism: | SPECIES UNKNOWN |
| Length: | 291 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HGNC:9210|MIM:17....
| Description | E-value | Query Range |
Subject Range |
|
|
4.0E-49 | [1..291] | [1..291] |
|
|
4.0E-49 | [1..291] | [1..291] |
|
|
1.0E-48 | [1..291] | [1..291] |
|
|
4.0E-48 | [1..291] | [1..291] |
|
|
7.0E-48 | [1..291] | [1..291] |
|
|
9.0E-48 | [1..291] | [1..291] |
|
|
2.0E-47 | [1..291] | [1..291] |
|
Region A: Residues: [1-137] |
1 11 21 31 41 51
| | | | | |
1 MSCQAFTSAD TFIPLNSDAS ATLPLIMHHS AAECLPVSNH ATNVMSTATG LHYSVPSCHY 60
61 GNQPSTYGVM AGSLTPCLYK FPDHTLSHGF PPIHQPLLAE DPTAADFKQE LRRKSKLVEE 120
121 PIDMDSPEIR ELEKFAN
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.510 | a.1.1 | Globin-like |
| View | Download | 0.462 | a.118.1 | ARM repeat |
| View | Download | 0.416 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.422 | a.29.2 | Bromodomain |
| View | Download | 0.535 | d.130.1 | S-adenosylmethionine synthetase |
|
Region A: Residues: [138-291] |
1 11 21 31 41 51
| | | | | |
1 EFKVRRIKLG YTQTNVGEAL AAVHGSEFSQ TTICRFENLQ LSFKNACKLK AILSKWLEEA 60
61 EQVGALYNEK VGANERKRKR RTTISIAAKD ALERHFGEQN KPSSQEIMRM AEELNLEKEV 120
121 VRVWFCNRRQ REKRVKTSLN QSLFSISKEH LECR
|
| Detection Method: | |
| Confidence: | 26.39794 |
| Match: | 1au7A |
| Description: | Pit-1 POU homeodomain; Pit-1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| DNA binding | 5.51228466689923 | bayes_pls_golite062009 |
| nucleic acid binding | 5.37468811865033 | bayes_pls_golite062009 |
| transcription regulator activity | 5.05236457497789 | bayes_pls_golite062009 |
| transcription factor activity | 3.89464979825638 | bayes_pls_golite062009 |
| binding | 3.66501723413351 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 3.25218945600666 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 3.22754992035091 | bayes_pls_golite062009 |
| transcription activator activity | 3.15886611325686 | bayes_pls_golite062009 |
| transcription repressor activity | 1.75958281319075 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 1.62096064323298 | bayes_pls_golite062009 |
| protein binding | 1.55649304400241 | bayes_pls_golite062009 |
| chromatin binding | 1.2739759748489 | bayes_pls_golite062009 |
| transcription factor binding | 1.02788976342343 | bayes_pls_golite062009 |
| specific RNA polymerase II transcription factor activity | 0.92393807212912 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.8718993114781 | bayes_pls_golite062009 |
| transcription coactivator activity | 0.81316180547536 | bayes_pls_golite062009 |
| promoter binding | 0.22765608166458 | bayes_pls_golite062009 |
| catalytic activity | 0.00446472034106909 | bayes_pls_golite062009 |
