| Protein: | gi|24349596, gi|... |
| Organism: | Shewanella oneidensis MR-1 |
| Length: | 512 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24349596, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
512.0 | [0..7] | [512..2] |
|
|
510.0 | [0..7] | [512..2] |
|
Region A: Residues: [1-512] |
1 11 21 31 41 51
| | | | | |
1 MSVNQNRSGK HALMWFRQDL RLTDNQAFTA ACDWVRQHHA AKLKAIYIAT PSQWHQHDIA 60
61 PIQLDFIQRH VNLLAQGLVS LGVEFELIQL DSFRDIPAFL TSYCEEHSIG RVFAGQEPEI 120
121 NEQKRDQACV EAGIPLSLSD EHCLLPPGTV LNLSGDMYRV FTPFSRKWRE VAAKQAILPL 180
181 GVPAPLGSIL SEPKPLFFKN IGSTYLAASK DIASSKKGFN QTAPNPLISS EQWAAGEGQA 240
241 KRLLNQFIQQ KVQDYKQDRD FPAIDGTSVI SPYLAIGVLS PRQCVAALLQ RFPEVIVDDT 300
301 SPGRTWLNEL IWREFYRHLL VAFPDLSKGN NFNRQADHVL WRNNQSEFLA WCEGKTGYPI 360
361 VDAAMRQLNQ TGWMHNRLRM VVASFLTKHL LIDWRWGERY FRQHLIDGDL AANNGGWQWS 420
421 AGCGCDAQPY FRIFNPMSQS EKFDPDGRFI RKYLPELASW GVTRLHQPNQ QKMPSLFEAP 480
481 LFASQADYPN AIVEHNAARA RALTVLGVLK KA
|
| Detection Method: |  |
| Confidence: | 135.0 |
| Match: | 1dnpA |
| Description: | C-terminal domain of DNA photolyase; DNA photolyase |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| blue light photoreceptor activity | 9.1431674572348 | bayes_pls_golite062009 |
| photoreceptor activity | 8.36697703010092 | bayes_pls_golite062009 |
| DNA photolyase activity | 5.59238172310626 | bayes_pls_golite062009 |
| transcription repressor activity | 4.08500855631983 | bayes_pls_golite062009 |
| transcription regulator activity | 3.49617875539388 | bayes_pls_golite062009 |
| nucleic acid binding | 2.19167058827256 | bayes_pls_golite062009 |
| binding | 2.13238451443633 | bayes_pls_golite062009 |
| G-protein coupled photoreceptor activity | 2.1101484978621 | bayes_pls_golite062009 |
| DNA binding | 2.05514577638135 | bayes_pls_golite062009 |
| deoxyribodipyrimidine photo-lyase activity | 2.01343813518186 | bayes_pls_golite062009 |
| FAD binding | 1.81559602758107 | bayes_pls_golite062009 |
| catalytic activity | 0.609980967042895 | bayes_pls_golite062009 |
| damaged DNA binding | 0.5555984473366 | bayes_pls_golite062009 |
| protein binding | 0.452275661161724 | bayes_pls_golite062009 |
