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Protein Overview: CRY2_ARATH

General Information:
Name(s) found: CRY2_ARATH [Swiss-Prot]
Description(s) found:
Found 33 descriptions.
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  • Cryptochrome-2 OS=Arabidopsis thaliana GN=CRY2 PE=1 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 612 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    vacuole [IDA]
    Biological Process: regulation of meristem growth [IGI]
    chromatin remodeling [IMP]
    phototropism [IGI]
    regulation of flower development [IDA]
    circadian regulation of calcium ion oscillation [IMP]
    stomatal movement [IGI]
    response to blue light [IMP]
    positive regulation of flower development [IMP]
    response to water deprivation [IGI]
    Molecular Function: protein homodimerization activity [IPI]
    blue light photoreceptor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKMDKKTIVW FRRDLRIEDN PALAAAAHEG SVFPVFIWCP EEEGQFYPGR ASRWWMKQSL  60
   61 AHLSQSLKAL GSDLTLIKTH NTISAILDCI RVTGATKVVF NHLYDPVSLV RDHTVKEKLV 120
  121 ERGISVQSYN GDLLYEPWEI YCEKGKPFTS FNSYWKKCLD MSIESVMLPP PWRLMPITAA 180
  181 AEAIWACSIE ELGLENEAEK PSNALLTRAW SPGWSNADKL LNEFIEKQLI DYAKNSKKVV 240
  241 GNSTSLLSPY LHFGEISVRH VFQCARMKQI IWARDKNSEG EESADLFLRG IGLREYSRYI 300
  301 CFNFPFTHEQ SLLSHLRFFP WDADVDKFKA WRQGRTGYPL VDAGMRELWA TGWMHNRIRV 360
  361 IVSSFAVKFL LLPWKWGMKY FWDTLLDADL ECDILGWQYI SGSIPDGHEL DRLDNPALQG 420
  421 AKYDPEGEYI RQWLPELARL PTEWIHHPWD APLTVLKASG VELGTNYAKP IVDIDTAREL 480
  481 LAKAISRTRE AQIMIGAAPD EIVADSFEAL GANTIKEPGL CPSVSSNDQQ VPSAVRYNGS 540
  541 KRVKPEEEEE RDMKKSRGFD ERELFSTAES SSSSSVFFVS QSCSLASEGK NLEGIQDSSD 600
  601 QITTSLGKNG CK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..536] PSI-BLAST 124.0 Crystal Structure of the PHR domain of Cryptochrome 1 from Arabidopsis thaliana
    2 View Details [537..612] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • blue light photoreceptor activity
    		•  9.1431674572348 bayes_pls_golite062009
  • photoreceptor activity
    		•  8.36697703010092 bayes_pls_golite062009
  • DNA photolyase activity
    		•  5.59238172310626 bayes_pls_golite062009
  • transcription repressor activity
    		•  4.08500855631983 bayes_pls_golite062009
  • transcription regulator activity
    		•  3.49617875539388 bayes_pls_golite062009
  • nucleic acid binding
    		•  2.19167058827256 bayes_pls_golite062009
  • binding
    		•  2.13238451443633 bayes_pls_golite062009
  • G-protein coupled photoreceptor activity
    		•  2.1101484978621 bayes_pls_golite062009
  • DNA binding
    		•  2.05514577638135 bayes_pls_golite062009
  • deoxyribodipyrimidine photo-lyase activity
    		•  2.01343813518186 bayes_pls_golite062009
  • FAD binding
    		•  1.81559602758107 bayes_pls_golite062009
  • catalytic activity
    		•  0.609980967042895 bayes_pls_golite062009
  • damaged DNA binding
    		•  0.5555984473366 bayes_pls_golite062009
  • protein binding
    		•  0.452275661161724 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.84

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle