| Protein: | gi|24347898, gi|... |
| Organism: | Shewanella oneidensis MR-1 |
| Length: | 1002 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24347898, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
461.0 | [0..1] | [1002..1] |
|
|
448.0 | [0..1] | [1002..1] |
|
|
436.0 | [0..1] | [990..1] |
|
|
427.0 | [0..1] | [531..1] |
|
|
426.0 | [0..1] | [531..1] |
|
|
423.0 | [0..1] | [531..1] |
|
|
418.0 | [0..1] | [531..1] |
|
|
414.0 | [0..1] | [984..1] |
|
|
413.0 | [0..1] | [433..1] |
|
|
411.0 | [0..1] | [433..1] |
|
Region A: Residues: [1-403] |
1 11 21 31 41 51
| | | | | |
1 MSYQVLARKW RPATFEQMVG QSHVLHALTN ALTQQRLHHA YLFTGTRGVG KTSLARLFAK 60
61 GLNCETGVTA SPCGVCGSCV EIAQGRFVDL IEVDAASRTK VDDTRELLDN VQYRPTRGRF 120
121 KVYLIDEVHM LSRSSFNALL KTLEEPPEHV KFLLATTDPQ KLPVTVLSRC LQFNLKSLTQ 180
181 QEIGTQLQHI LTQEQLPFEH EALGLLAKSA NGSMRDALSL TDQAIAFGGG TVMLNQVQSM 240
241 LGSIDEQHVL GLLKALTDAD IGALMQSCAQ VLAYGADAQE VLRSLLELLH QITLTQFAPA 300
301 AAQQSLYSAQ IQAFAEQLAP EQVQLYYQIL LTGRKDLPHA PDPKSGLEMA LLRAVAFVPE 360
361 KSVKRWQVDD AVKVDLSAQP ALTPQATIPP EVPAERQLAV NAP
|
| Detection Method: |  |
| Confidence: | 113.0 |
| Match: | 1xxiB |
| Description: | ADP Bound E. coli Clamp Loader Complex |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| DNA-directed DNA polymerase activity | 6.09279996112705 | bayes_pls_golite062009 |
| DNA polymerase activity | 6.04865791514294 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 3.99580940620614 | bayes_pls_golite062009 |
| pyrophosphatase activity | 2.23646936731119 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 1.77451606086272 | bayes_pls_golite062009 |
| protein binding | 1.47495963188519 | bayes_pls_golite062009 |
| catalytic activity | 1.32370671504792 | bayes_pls_golite062009 |
| transferase activity | 1.23626141560528 | bayes_pls_golite062009 |
| binding | 1.1871951458401 | bayes_pls_golite062009 |
| helicase activity | 0.895387263223335 | bayes_pls_golite062009 |
| microtubule motor activity | 0.87576779858246 | bayes_pls_golite062009 |
| motor activity | 0.85227282360407 | bayes_pls_golite062009 |
| DNA helicase activity | 0.8104901979223 | bayes_pls_golite062009 |
| nucleic acid binding | 0.625617128641089 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.248432446853676 | bayes_pls_golite062009 |
| protein-DNA loading ATPase activity | 0.24468171323128 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 0.217252531553173 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 0.215962398124297 | bayes_pls_golite062009 |
| DNA clamp loader activity | 0.20238478387743 | bayes_pls_golite062009 |
| purine NTP-dependent helicase activity | 0.156322124775303 | bayes_pls_golite062009 |
| ATP-dependent helicase activity | 0.156322124775303 | bayes_pls_golite062009 |
| ATPase activity | 0.0740243885501273 | bayes_pls_golite062009 |
| ATP-dependent DNA helicase activity | 0.0398638249772338 | bayes_pls_golite062009 |
| DNA binding | 0.0064778111446141 | bayes_pls_golite062009 |
|
Region A: Residues: [404-485] |
1 11 21 31 41 51
| | | | | |
1 VAEKKTLLAT VANPEAQLQA ETTPETALED DEPELNAALI AEQQVILSQA QSQGFGASAD 60
61 PVVSSNTALN QDVNSSDPTD PD
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [486-641] |
1 11 21 31 41 51
| | | | | |
1 TALTEQTATE DVLDAQNTAG DLAPEPYVAE AYGQYDYAQS NDAQSNYAQF NHAQSYDTST 60
61 PLDAYQDDYA HFMSEDAAEQ LIISEHAVEQ LSASEGNLFS NGSAQHSASN QTGQVFAVDN 120
121 TQVAKAAVSL EDDDILSAVL AARESLLSDL DALSTK
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [642-853] |
1 11 21 31 41 51
| | | | | |
1 DGDGKKLSPD VKAKTPTSNA HSRPATSVNV SPRPGQNAVT LEFESDFELP FDDDFEAEIY 60
61 TKPELSTKAT NAPLAPLSTR PITHSIIVPS TQQSAAAQHL PLDPNDRPPW EDAPVAECHH 120
121 GNAEPITTSR QVNEESHLRQ ESAALHAPLL AVEPVQVAPA LTLPTNTQAA QVEQAAGQSH 180
181 QLNHPDEVPA TPPRELDAAA PPAPASDLTV AQ
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [854-1002] |
1 11 21 31 41 51
| | | | | |
1 SITGHPLDLH WYKLMASLDI GGRVRQLAVN SICQVQSNPL PLLLKPDQKH LAAQVAIEQL 60
61 EQALTAALGA PRQVEVVIGT DPSRETPLEL RKRFHQELLQ QARQSLIMDD NVQWLINRFG 120
121 AELENDSLLY PPELLNQRSG LIPALPEPE
|
| Detection Method: | |
| Confidence: | 27.39794 |
| Match: | 2ayaA |
| Description: | No description for 2ayaA was found. |
