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View Structure Prediction Details

Protein: gi|24372985, gi|...
Organism: Shewanella oneidensis MR-1
Length: 102 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24372985, gi|....

Description E-value Query
Range		 Subject
Range
gi|22003413 - gi|22003413|gb|AAM88668.1|AF390440_4 copper transporter [Pseudomonas putida]
 108.0 [0..10] [101..56]
gi|74007803 - gi|74007803|ref|XP_860306.1| PREDICTED: similar to ATPase, Cu++ transporting, alpha polypeptide isof...
 108.0 [0..4] [100..252]
gi|12699456 - gi|12699456|gb|AAG47431.1| ATP7A [Pedetes capensis]
 107.0 [0..4] [102..40]
gi|458224 - gi|458224|gb|AAB08487.1| putative copper efflux ATPase
 105.0 [0..4] [100..225]
gi|162319384 - gi|162319384|gb|AAI56438.1| ATPase, Cu++ transporting, alpha polypeptide [synthetic construct]
ATP7A - ATPase, Cu++ transporting, alpha polypeptide
 105.0 [0..4] [100..252]
gi|56548027 - gi|56548027|gb|AAV93032.1| ATPase 7A [Craseonycteris thonglongyai]
 105.0 [0..4] [102..40]

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Predicted Domain #1
Region A:
Residues: [1-102] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLLSRITRL TLLVITSLGF TPFTWADNLL VTLDVKGMTC PLCVTVVNQA LRKTDGVIKA  60
   61 KANLKTEQAV VTVAEDYNLD NLLKAVDATG YKGSINKVEK QS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 17.0
Match: 1p6tA
Description: Structure characterization of the water soluble region of P-type ATPase CopA from Bacillus subtilis
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
transition metal ion transmembrane transporter activity 6.03321487332685 bayes_pls_golite062009
cation transmembrane transporter activity 4.39263625687255 bayes_pls_golite062009
ion transmembrane transporter activity 4.38249399795261 bayes_pls_golite062009
inorganic cation transmembrane transporter activity 4.3711890288217 bayes_pls_golite062009
di-, tri-valent inorganic cation transmembrane transporter activity 4.31646522664471 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 4.24010179037512 bayes_pls_golite062009
copper chaperone activity 4.11817379318933 bayes_pls_golite062009
copper ion binding 3.42682876539918 bayes_pls_golite062009
metallochaperone activity 3.38720397498211 bayes_pls_golite062009
ATPase activity, coupled to transmembrane movement of substances 3.37977331645993 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances 3.37943745176894 bayes_pls_golite062009
ATPase activity, coupled to movement of substances 3.37943745176894 bayes_pls_golite062009
active transmembrane transporter activity 3.37768454278657 bayes_pls_golite062009
P-P-bond-hydrolysis-driven transmembrane transporter activity 3.36943909887415 bayes_pls_golite062009
metal ion transmembrane transporter activity 3.36143792136115 bayes_pls_golite062009
primary active transmembrane transporter activity 3.36019108464649 bayes_pls_golite062009
ATPase activity, coupled to transmembrane movement of ions 3.09358471441624 bayes_pls_golite062009
transporter activity 2.8705480078347 bayes_pls_golite062009
ATPase activity, coupled 2.7689645069905 bayes_pls_golite062009
ATPase activity 2.76828132452539 bayes_pls_golite062009
transmembrane transporter activity 2.65855530890213 bayes_pls_golite062009
copper ion transmembrane transporter activity 2.61801198127747 bayes_pls_golite062009
transition metal ion binding 2.6049784579434 bayes_pls_golite062009
copper-dependent protein binding 2.60474501928416 bayes_pls_golite062009
copper-transporting ATPase activity 2.53119335076695 bayes_pls_golite062009
copper-exporting ATPase activity 2.47616210941775 bayes_pls_golite062009
substrate-specific transporter activity 2.42313469184646 bayes_pls_golite062009
ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism 2.08756829971402 bayes_pls_golite062009
cation binding 1.84981492985167 bayes_pls_golite062009
metal ion binding 1.84981492985167 bayes_pls_golite062009
binding 1.84926272403445 bayes_pls_golite062009
hydrolase activity 1.60009008498246 bayes_pls_golite062009
superoxide dismutase copper chaperone activity 1.54291890629609 bayes_pls_golite062009
ion binding 1.07409701266582 bayes_pls_golite062009
protein binding 0.736752132095517 bayes_pls_golite062009
nucleoside-triphosphatase activity 0.508360443861132 bayes_pls_golite062009
pyrophosphatase activity 0.470327716716451 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides 0.452477805627897 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 0.45132236262635 bayes_pls_golite062009
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