| Protein: | CSN12_YEAST |
| Organism: | Saccharomyces cerevisiae S288c |
| Length: | 423 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CSN12_YEAST.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..423] | [1..423] |
|
|
4.0E-94 | [23..420] | [40..393] |
|
|
7.0E-86 | [23..420] | [39..391] |
|
|
9.0E-85 | [27..415] | [95..418] |
|
Region A: Residues: [1-103] |
1 11 21 31 41 51
| | | | | |
1 MDVDIGCYFE EKRYDDKLLD FIRYDVKTPK KTKYILQRPT ATDEESVRLQ RFYQLGVDLK 60
61 LKYSKRRSLK KQGRIKNATE ELLRLANEQL KLFNRIVERE TNW
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [104-423] |
1 11 21 31 41 51
| | | | | |
1 IIYPLWVMAK QLIRLANESS ELNKDSIEEC GRTIHRSFTI CLNDRNPRLN ENKKIGCYMF 60
61 ANLEFSIYHR LSNKDMIKNL VKVLESRVNA RDIPPLNKSL AMEHKSQVVL YNYYLGQYYG 120
121 CLENDHERGF FHLNEALLQC PMLYVESTGK FVLQGQMEKI MILLVPLALL TKRLYPHWDH 180
181 PVIAGVITRS KRLSQVYPTL VRSVISGNLS LYEATAASHE RFFLSQGLHV VITLLREVVF 240
241 TRLVQRCWQW GNDRKSIMPL KILLATKQHD SSANEDEEEQ LDALECRLAS AIASGLLRAY 300
301 LSHSNRCIVF SKKEPFPHSK
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [356-423] |
1 11 21 31 41 51
| | | | | |
1 DRKSIMPLKI LLATKQHDSS ANEDEEEQLD ALECRLASAI ASGLLRAYLS HSNRCIVFSK 60
61 KEPFPHSK
|
| Detection Method: | |
| Confidence: | 1.96 |
| Match: | 1ufmA |
| Description: | Solution structure of the PCI domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 4.13436454849845 | bayes_pls_golite062009 |
| DNA binding | 3.77959139017704 | bayes_pls_golite062009 |
| nucleic acid binding | 3.61852605343839 | bayes_pls_golite062009 |
| binding | 3.37660003833383 | bayes_pls_golite062009 |
| transcription factor activity | 3.18366984273735 | bayes_pls_golite062009 |
| transcription repressor activity | 2.13838000453063 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 1.67826024217505 | bayes_pls_golite062009 |
| transcription activator activity | 1.36268391567196 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 1.01831614309793 | bayes_pls_golite062009 |
| protein binding | 0.726445167461826 | bayes_pls_golite062009 |
| RNA binding | 0.309381817803407 | bayes_pls_golite062009 |
| transcription factor binding | 0.0307736199991748 | bayes_pls_golite062009 |
