| Protein: | ENSCJAT00000012664 |
| Organism: | Callithrix jacchus |
| Length: | 445 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ENSCJAT00000012664.
| Description | E-value | Query Range |
Subject Range |
|
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0.0 | [1..445] | [1..445] |
|
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0.0 | [1..445] | [1..445] |
|
|
0.0 | [1..445] | [1..445] |
|
|
0.0 | [1..445] | [1..445] |
|
|
0.0 | [1..445] | [1..445] |
|
|
0.0 | [1..445] | [1..446] |
|
|
0.0 | [1..445] | [1..446] |
|
Region A: Residues: [1-130] |
1 11 21 31 41 51
| | | | | |
1 MAEYDLTTRI AHFLDRHLVF PLLEFLSVKE IYNEKELLQG KLDLLSDTNM VDFAMDVYKN 60
61 LYSDDIPHAL REKRTTVVAQ LKQLQAETEP IVKMFEDPET TRQMQSTRDG RMLFDYLADK 120
121 HGFRQEYLDT
|
| Detection Method: |  |
| Confidence: | 81.0 |
| Match: | PF09440.1 |
| Description: | No description for PF09440.1 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [131-302] |
1 11 21 31 41 51
| | | | | |
1 LYRYAKFQYE CGNYSGAAEY LYFFRVLVPA TDRNALSSLW GKLASEILMQ NWDAAMEDLT 60
61 RLKETIDNNS VSSPLQSLQQ RTWLIHWSLF VFFNHPKGRD NIIDLFLYQP QYLNAIQTMC 120
121 PHILRYLTTA VITNKDVRKR RQVLKDLVKV IQQESYTYKD PITEFVECLY VN
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [303-445] |
1 11 21 31 41 51
| | | | | |
1 FDFDGAQKKL RECESVLVND FFLVACLEDF IENARLFIFE TFCRIHQCIS INMLADKLNM 60
61 TPEEAERWIV NLIRNARLDA KIDSKLGHVV MGNNAVSPYQ QVIEKTKSLS FRSQMLAMNI 120
121 EKKLNQNSRS EAPNWATQDS GFY
|
| Detection Method: | |
| Confidence: | 2.74 |
| Match: | 1ufmA |
| Description: | Solution structure of the PCI domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 4.83417082121324 | bayes_pls_golite062009 |
| DNA binding | 4.45307043231712 | bayes_pls_golite062009 |
| nucleic acid binding | 4.31598146918736 | bayes_pls_golite062009 |
| transcription factor activity | 3.74401182888821 | bayes_pls_golite062009 |
| binding | 3.37660003833383 | bayes_pls_golite062009 |
| structural constituent of ribosome | 2.974370828939 | bayes_pls_golite062009 |
| transcription activator activity | 2.95095409497726 | bayes_pls_golite062009 |
| structural molecule activity | 2.72616711594099 | bayes_pls_golite062009 |
| RNA binding | 2.57915942568691 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 2.13497236448364 | bayes_pls_golite062009 |
| transcription repressor activity | 1.87251560747782 | bayes_pls_golite062009 |
| protein binding | 1.77689943618029 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 1.30087087585117 | bayes_pls_golite062009 |
| mRNA binding | 1.03970887182906 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 1.01831614309793 | bayes_pls_golite062009 |
| transcription factor binding | 0.675707749846405 | bayes_pls_golite062009 |
| hydrolase activity | 0.20695163916851 | bayes_pls_golite062009 |
| ubiquitin-protein ligase activity | 0.142921675412538 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 0.124542865343065 | bayes_pls_golite062009 |
