| Protein: | ubc-17 |
| Organism: | Caenorhabditis elegans |
| Length: | 679 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ubc-17.
| Description | E-value | Query Range |
Subject Range |
|
|
552.0 | [0..18] | [679..15] |
|
Region A: Residues: [1-149] |
1 11 21 31 41 51
| | | | | |
1 MSSQASQRSS STSAVAQKTR ERRKSKSRRR CWFGCLWLSS RVSLIRSSSR FSRSPEPDES 60
61 LTAIDKVMSI INEKPLKMAH ILKTARYNPR FLPKINNHFY RRFVNDVSFS ERKQFVECGV 120
121 IHHLLELIGE TAISDFSASS RSADEQKRR
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [150-399] |
1 11 21 31 41 51
| | | | | |
1 ARRNSSASLS HKGTGYGTGS TRSRWDIERT VEEKLIREEH LTWLLSILNS FMLGWPTTDN 60
61 LKTKPEELVH MTEIAIKLIA DSSVLSILEY NLRNDSFFDA LLETAASMAA TPGLVPFLVR 120
121 PYTSSAKSIA KELIPRFKEN ILSIQARWGG TLEETNFRMA EFTAKVTLLS DYVINAARAY 180
181 EQTLPPEQRI QTATHRRPSH SGLHSKMQGP KDDETIYKNK MQELQLQTAK FIGDFGKLCV 240
241 PYVFRKEAKN
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [400-578] |
1 11 21 31 41 51
| | | | | |
1 INPFSPHLRD RTKRIAKELA SIANALPLNA SNSIYVCYDE GRVDIIKVLI SGPDDTPYAN 60
61 GLFEFDIFFP TGYPFSPPKC AFLTTGSGNV RFNPNLYNDG KICLSILGTW EGRPEEKWNP 120
121 YCSLMQVLVS IQEVIEKHLW LKREAILKQA QAWIDNVSND FGDDKMSKRK DVFAFETGF
|
| Detection Method: | |
| Confidence: | 44.09691 |
| Match: | 2c4oA |
| Description: | No description for 2c4oA was found. |
| Term | Confidence | Notes |
| ubiquitin-protein ligase activity | 7.07009148420636 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 7.03976510657099 | bayes_pls_golite062009 |
| acid-amino acid ligase activity | 6.00007452476109 | bayes_pls_golite062009 |
| ligase activity, forming carbon-nitrogen bonds | 5.06177413452771 | bayes_pls_golite062009 |
| ligase activity | 1.88059319399119 | bayes_pls_golite062009 |
| protein binding | 1.77678273247394 | bayes_pls_golite062009 |
| binding | 1.75350658654805 | bayes_pls_golite062009 |
| nucleic acid binding | 1.46828741962969 | bayes_pls_golite062009 |
| transcription regulator activity | 1.42147247383136 | bayes_pls_golite062009 |
| DNA binding | 1.31679667558286 | bayes_pls_golite062009 |
| transcription repressor activity | 0.905654666464382 | bayes_pls_golite062009 |
| catalytic activity | 0.891402822028799 | bayes_pls_golite062009 |
| SUMO ligase activity | 0.843488104298821 | bayes_pls_golite062009 |
| transcription activator activity | 0.827751482920916 | bayes_pls_golite062009 |
| NEDD8 ligase activity | 0.715654744941217 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 0.58835335751383 | bayes_pls_golite062009 |
| kinase activity | 0.519703305315987 | bayes_pls_golite062009 |
| protein kinase activity | 0.443948654247666 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.373779304908933 | bayes_pls_golite062009 |
| protein serine/threonine kinase activity | 0.182854082413338 | bayes_pls_golite062009 |
| transferase activity | 0.0984525836903841 | bayes_pls_golite062009 |
|
Region A: Residues: [579-679] |
1 11 21 31 41 51
| | | | | |
1 NPATQERVIH NLIQELQAMQ SPFAKEEAEE SERLKREQSE KEEKQKKEAA ALAEIEREKR 60
61 ELELDFQRRR SSVLATHVAV IRTQPTGDYS VPSVNEPSTS S
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
