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View Structure Prediction Details

Protein: gi|16604396, gi|...
Organism: Arabidopsis thaliana
Length: 357 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|16604396, gi|....

Description E-value Query
Range
Subject
Range
gi|50198977, gi|... - gi|50198977|gb|AAT70490.1| At5g18630 [Arabidopsis thaliana], gi|42570528|ref|NP_850848.2| lipase cla...
342.0 [0..1] [357..1]

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Predicted Domain #1
Region A:
Residues: [1-357]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGQKRLLFLL AVFTFLVSSS YGRVLKLKSD DDRPVYNHTL AVTLVEYASA VYESDLTKLF  60
   61 TWTCERCNGL TKDFEVIEVI FDVEHCLQAY VGVAKDLNAI IIAFRGTQEH SIQNWVSDLF 120
  121 WKQLDLNYPD MPDAMVHHGF YSAYHNTTLR PAVLDAITRV KKVYGANINI IVTGHSMGGA 180
  181 MASFCGLDLV VNEGEENVQV MTFGQPRVGN AAFASYYSLL VPNTFRITHD RDMVPHLPPY 240
  241 YYHFPQKTYH HFPTEVWVKD FSFSNFVLFG LEKVCDNTGE DPTCSRSVRG NSISDHLRYF 300
  301 GVELKCESWR QCSIVMNQDM ERYSRKDSRG NLFLSRTVPP KDVVKTSSLS KTGISSL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 50.0
Match: 1lgyA
Description: Triacylglycerol lipase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrolase activity 2.86629089940305 bayes_pls_golite062009
feruloyl esterase activity 2.72811654234539 bayes_pls_golite062009
peptidase activity 2.1043444278599 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 2.01248951370611 bayes_pls_golite062009
peptidase activity, acting on L-amino acid peptides 1.87809019006667 bayes_pls_golite062009
serine hydrolase activity 1.44379731946401 bayes_pls_golite062009
carboxylesterase activity 1.44153094300956 bayes_pls_golite062009
catalytic activity 1.39629727416851 bayes_pls_golite062009
serine-type peptidase activity 1.25441895074845 bayes_pls_golite062009
endopeptidase activity 0.38758092280677 bayes_pls_golite062009
lipase activity 0.29304199367465 bayes_pls_golite062009
exopeptidase activity 0.206065598284849 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle