| Protein: | SYIM_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 1093 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SYIM_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
904.0 | [0..20] | [1090..1] |
|
Region A: Residues: [1-111] |
1 11 21 31 41 51
| | | | | |
1 MSSFFKSFAG NPREAAAMAM VQSSSYRVLS GKSCSNLRRN TPLDSFLAKG RSSVKAFSFL 60
61 YVSRFSTEPN NEFGHSSKRR SRGPVMAAKK ASEGEKQEDG KYKQTVDLPK T
|
| Detection Method: |  |
| Confidence: | 12.69897 |
| Match: | 1iq0A |
| Description: | Arginyl-tRNA synthetase (ArgRS); Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [112-1093] |
1 11 21 31 41 51
| | | | | |
1 GFGMRANSLT REPELQKLWE ENQVFKRVSD NNNGGSFILH DGPPYANGDL HMGHALNKIL 60
61 KDIINRYKLL QNYKVQYVPG WDCHGLPIEL KVLQSLDQEV RKELTPLKLR AKAAKFAKAT 120
121 VKTQMESFKR FGVWADWNNP YLTLDPEYEA AQIEVFGQMA LKGYIYRGRK PVHWSPSSRT 180
181 ALAEAELEYP EGHISKSIYA IFKLVGGAKT SLLDEFIPNI YLAVWTTTPW TMPANAAVAV 240
241 NAKLQYSVVE VQSFSEDEST VTSNKKKIPG KVLKNQQKLF VIVATDLVPA LEAKWGVKLS 300
301 ISKTFLGSDL ENCRYTHPID NRDCPVVIGG DYITTESGTG LVHTAPGHGQ EDYATGLKYG 360
361 LPLVSPVDDE GKFTEEAGQF RGLSVLGEGN TAVVSYLDEN MSLVMEESYA HKYPYDWRTK 420
421 KPTIFRATEQ WFASVEGFRT ATMDAINNVK WVPHQAVNRI SAMTSSRSDW CISRQRTWGV 480
481 PIPAFYHVKT KEPLMNEETI NHVKSIISQK GSDAWWYMSV EDLLPEKYRD KAADYEKGTD 540
541 TMDVWFDSGS SWAGVLGKRE GLSFPADVYL EGTDQHRGWF QSSLLTSIAT QGKAPYSAVI 600
601 THGFVLDEKG MKMSKSLGNV VDPRLVIEGG KNSKDAPAYG ADVMRLWVSS VDYTGDVLIG 660
661 PQILRQMSDI YRKLRGTLRY LLGNLHDWRV DNAVPYQDLP IIDQHALFQL ENVVKNIQEC 720
721 YENYQFFKIF QIIQRFTIVD LSNFYFDIAK DRLYTGGTSS FTRRSCQTVL STHLLSILRV 780
781 IAPIVPHLAE DVWQNLPFEY RNEDGSAAEF VFELKWPTLN EQWLSFPAED VLFWQRLLEL 840
841 RTEVNKVLEL ARNEKMIGSS LEAKVYLHTA DAGMAAKLLE MSEAKNEADT LQRIFITSQV 900
901 EVLSSMEKEM ISSVQHTGEY VEGENKVWIG VSRAEGSKCE RCWNYSGQVG SFSDHPTLCG 960
961 RCFSVIVANP PEPAVAAVNS LA
|
| Detection Method: | |
| Confidence: | 1000.0 |
| Match: | 1ffyA |
| Description: | Isoleucyl-tRNA synthetase (IleRS) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ligase activity, forming aminoacyl-tRNA and related compounds | 7.16276509815667 | bayes_pls_golite062009 |
| ligase activity, forming carbon-oxygen bonds | 7.16276509815667 | bayes_pls_golite062009 |
| aminoacyl-tRNA ligase activity | 7.13957775963187 | bayes_pls_golite062009 |
| valine-tRNA ligase activity | 7.13767629265822 | bayes_pls_golite062009 |
| leucine-tRNA ligase activity | 7.03538514482698 | bayes_pls_golite062009 |
| isoleucine-tRNA ligase activity | 6.38633897147986 | bayes_pls_golite062009 |
| ligase activity | 6.11211476973434 | bayes_pls_golite062009 |
| glutamate-tRNA ligase activity | 2.63681738794687 | bayes_pls_golite062009 |
| methionine-tRNA ligase activity | 2.56893064485672 | bayes_pls_golite062009 |
| catalytic activity | 2.37674226834122 | bayes_pls_golite062009 |
| tyrosine-tRNA ligase activity | 1.88984817882585 | bayes_pls_golite062009 |
| arginine-tRNA ligase activity | 1.50161401062914 | bayes_pls_golite062009 |
| tryptophan-tRNA ligase activity | 1.14187887833901 | bayes_pls_golite062009 |
| cysteine-tRNA ligase activity | 0.844943947059557 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.625793556381714 | bayes_pls_golite062009 |
| binding | 0.485102284225571 | bayes_pls_golite062009 |
| nucleic acid binding | 0.449504767632354 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 0.2293846471193 | bayes_pls_golite062009 |
| glutamine-tRNA ligase activity | 0.118292082006187 | bayes_pls_golite062009 |
