| Protein: | gi|21592655, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 291 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|21592655, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
190.0 | [0..99] | [289..1] |
|
Region A: Residues: [1-101] |
1 11 21 31 41 51
| | | | | |
1 MAQSCLKIVR INNLRNRVNR RILILRRFTR LLWSRIVACT PGKSRRYLLL SRALPSPTVS 60
61 RPSPSPIPAV DVVVGGGGGG GEFVRRSSVV YDNDNSHRRS D
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.729 | d.17.2 | Copper amine oxidase, domains 1 and 2 |
| View | Download | 0.636 | d.17.2 | Copper amine oxidase, domains 1 and 2 |
| View | Download | 0.620 | d.67.2 | Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain |
| View | Download | 0.603 | d.17.2 | Copper amine oxidase, domains 1 and 2 |
| View | Download | 0.583 | a.74.1 | Cyclin-like |
|
Region A: Residues: [102-291] |
1 11 21 31 41 51
| | | | | |
1 SDLVSLKISL LGDPEIGKTS FLAKYVGEEK EVEMRELEKG INCTDKTLYM GGARISYSIW 60
61 ELEAERSRDQ IPVACKDSVA ILFMFDLTSR CTLNSVISWY QQARKSNQTA IPVMVGTKFD 120
121 EFIQLPIDLQ WTIASQARTY AKALNATLFF SSASYNINVN KIFKFVTAKL FDLPWTVERN 180
181 LTIGEPIIDF
|
| Detection Method: | |
| Confidence: | 46.221849 |
| Match: | 2folA |
| Description: | Crystal structure of human RAB1A in complex with GDP |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| microtubule motor activity | 3.4297361345158 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 3.35731768967288 | bayes_pls_golite062009 |
| pyrophosphatase activity | 3.27731862965146 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 3.25621165738898 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 3.25495234707235 | bayes_pls_golite062009 |
| motor activity | 2.60481158518321 | bayes_pls_golite062009 |
| binding | 2.21604035604783 | bayes_pls_golite062009 |
| ATPase activity | 2.04651885449197 | bayes_pls_golite062009 |
| guanyl nucleotide binding | 1.89320355239381 | bayes_pls_golite062009 |
| guanyl ribonucleotide binding | 1.88721318481223 | bayes_pls_golite062009 |
| GTP binding | 1.87900088157196 | bayes_pls_golite062009 |
| ATPase activity, coupled | 1.87142752786895 | bayes_pls_golite062009 |
| transporter activity | 1.85044926113762 | bayes_pls_golite062009 |
| hydrolase activity | 1.6901766958628 | bayes_pls_golite062009 |
| transmembrane transporter activity | 1.656935231793 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 1.50574672650697 | bayes_pls_golite062009 |
| microfilament motor activity | 1.28029120876672 | bayes_pls_golite062009 |
| GTPase activity | 1.23010905798386 | bayes_pls_golite062009 |
| tubulin binding | 1.01673904002272 | bayes_pls_golite062009 |
| catalytic activity | 1.00104173493322 | bayes_pls_golite062009 |
| ATP binding | 0.98146619596929 | bayes_pls_golite062009 |
| adenyl ribonucleotide binding | 0.949788783884952 | bayes_pls_golite062009 |
| adenyl nucleotide binding | 0.931486373329219 | bayes_pls_golite062009 |
| purine nucleotide binding | 0.929901285538132 | bayes_pls_golite062009 |
| nucleotide binding | 0.922442819194247 | bayes_pls_golite062009 |
| purine ribonucleotide binding | 0.920987930180051 | bayes_pls_golite062009 |
| ribonucleotide binding | 0.920926158369519 | bayes_pls_golite062009 |
| microtubule binding | 0.902404986889887 | bayes_pls_golite062009 |
| actin binding | 0.875514430441177 | bayes_pls_golite062009 |
| plus-end-directed microtubule motor activity | 0.773586048423911 | bayes_pls_golite062009 |
| protein methyltransferase activity | 0.500054585029736 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.464456497491373 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 0.434775387083003 | bayes_pls_golite062009 |
| actin-dependent ATPase activity | 0.36110509588725 | bayes_pls_golite062009 |
| nucleic acid binding | 0.318452816722389 | bayes_pls_golite062009 |
| primary active transmembrane transporter activity | 0.294474570607914 | bayes_pls_golite062009 |
| P-P-bond-hydrolysis-driven transmembrane transporter activity | 0.282352478532746 | bayes_pls_golite062009 |
| kinase activity | 0.221444513155443 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | 0.220608508617331 | bayes_pls_golite062009 |
| ATPase activity, coupled to transmembrane movement of substances | 0.219533217661421 | bayes_pls_golite062009 |
| ATPase activity, coupled to movement of substances | 0.219157471322311 | bayes_pls_golite062009 |
| structural constituent of ribosome | 0.208665086324262 | bayes_pls_golite062009 |
| protein binding | 0.170837278876362 | bayes_pls_golite062009 |
| histone methyltransferase activity | 0.1303395473854 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.0756212238097211 | bayes_pls_golite062009 |
| protein transporter activity | 0.0071389922757723 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 5.52757577200247E-4 | bayes_pls_golite062009 |
