| Protein: | gi|207340855 |
| Organism: | Saccharomyces cerevisiae AWRI1631 |
| Length: | 363 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|207340855.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..363] | [1..363] |
|
|
1.0E-84 | [4..322] | [50..422] |
|
|
6.0E-61 | [103..351] | [310..555] |
|
|
1.0E-59 | [71..363] | [134..402] |
|
|
1.0E-52 | [104..354] | [232..511] |
|
|
4.0E-52 | [100..352] | [280..522] |
|
|
8.0E-52 | [88..354] | [275..535] |
|
Region A: Residues: [1-96] |
1 11 21 31 41 51
| | | | | |
1 MLDNMQFHSP APEHPQLNGG INKIPASHKI GYKLNQQVQR LAVVRNNIEE RLNSMESSHG 60
61 QISDSSVVRA IDASIDDFLI PSPPLSPKLR QCPIIS
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [97-363] |
1 11 21 31 41 51
| | | | | |
1 QPQLVNVESD HRELIMLTPV WEAGLNSQKY NHNTRNFLSQ YSFFRDMKTT KRIPNKENRK 60
61 LKVVKSVVNS EALPKRRRYD RKIKRRSREL YEDDGNRSEN YDEESAQEVP VRSVTPIRQV 120
121 KRSLHTISSP LASQGVVNNV PKYIPSMSWE KLPDYSPPLH TLPNSNNKVL KVEWKGSPMD 180
181 LNHDPLKQRL HPAELVLAQI LRLPCDLYLD SKRRFFLEKV HRFKKGLPFR RTDAQKACRI 240
241 DVNKASRLFA AFEKVGWLQD KHFEKYL
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [250-363] |
1 11 21 31 41 51
| | | | | |
1 DYSPPLHTLP NSNNKVLKVE WKGSPMDLNH DPLKQRLHPA ELVLAQILRL PCDLYLDSKR 60
61 RFFLEKVHRF KKGLPFRRTD AQKACRIDVN KASRLFAAFE KVGWLQDKHF EKYL
|
| Detection Method: | |
| Confidence: | 27.0 |
| Match: | 2cujA |
| Description: | Solution structure of SWIRM domain of mouse transcriptional adaptor 2-like |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 3.61657063316558 | bayes_pls_golite062009 |
| DNA binding | 3.20600447901865 | bayes_pls_golite062009 |
| nucleic acid binding | 3.13775670276163 | bayes_pls_golite062009 |
| transcription factor activity | 2.61318050866004 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 2.14408928200987 | bayes_pls_golite062009 |
| binding | 2.12643314274039 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 1.77209608685482 | bayes_pls_golite062009 |
| transcription activator activity | 1.75864690109096 | bayes_pls_golite062009 |
| protein binding | 1.62529996900514 | bayes_pls_golite062009 |
| transcription repressor activity | 0.605733396003465 | bayes_pls_golite062009 |
| specific RNA polymerase II transcription factor activity | 0.380372494934551 | bayes_pls_golite062009 |
| chromatin binding | 0.346262410069781 | bayes_pls_golite062009 |
| transcription factor binding | 0.109547968922689 | bayes_pls_golite062009 |
