| Protein: | gi|220949552, gi... |
| Organism: | synthetic construct |
| Length: | 412 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|220949552, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
365.0 | [0..3] | [412..344] |
|
Region A: Residues: [1-330] |
1 11 21 31 41 51
| | | | | |
1 MFHNSNFFEP GKSKPERSFV QLAVKQNQRL DGRRSNESRD VELTFGKDWG SVAVSMGDTK 60
61 VLAQVTCEMG PPALSRPNEG KIHLNVYLGG VAFLDEAHTT HDQRSLKLNS LLERTFRSSR 120
121 SIDLESLCVA VEKHVWCIRV NVNVLNHDGN LYDASTIATL AALMHFRRPD VWYKDGELRI 180
181 FKKKEREFIP LLFHHYPVSV TYCVYKSSVQ PILDPTLLEE NAADSVIVLS FNSFQELCSL 240
241 TAGGTAPTNA RIIMQCARNA AVRCKSLLNF VRKALALDEE CRSQGDQSVD GLVALILNTE 300
301 HKLSYNKLMG RQKQEQQPPP SEKMQLDNNE
|
| Detection Method: |  |
| Confidence: | 68.522879 |
| Match: | 2nn6A |
| Description: | No description for 2nn6A was found. |
| Term | Confidence | Notes |
| exoribonuclease activity | 7.55877202113513 | bayes_pls_golite062009 |
| ribonuclease activity | 7.54644729272203 | bayes_pls_golite062009 |
| exoribonuclease activity, producing 5'-phosphomonoesters | 7.5310318714913 | bayes_pls_golite062009 |
| 3'-5'-exoribonuclease activity | 6.46930372693262 | bayes_pls_golite062009 |
| 3'-5' exonuclease activity | 4.29895100594643 | bayes_pls_golite062009 |
| exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | 3.83939403332553 | bayes_pls_golite062009 |
| exonuclease activity | 3.40686901061667 | bayes_pls_golite062009 |
| hydrolase activity, acting on ester bonds | 2.86434572018929 | bayes_pls_golite062009 |
| RNA binding | 2.05527376734941 | bayes_pls_golite062009 |
| structural constituent of ribosome | 1.90115575554186 | bayes_pls_golite062009 |
| structural molecule activity | 1.69321127364043 | bayes_pls_golite062009 |
| hydrolase activity | 1.55476709794855 | bayes_pls_golite062009 |
| transcription regulator activity | 1.20748032530392 | bayes_pls_golite062009 |
| mRNA binding | 1.17402119891853 | bayes_pls_golite062009 |
| nucleic acid binding | 1.05662964529454 | bayes_pls_golite062009 |
| binding | 0.907487229190259 | bayes_pls_golite062009 |
| catalytic activity | 0.878454819018611 | bayes_pls_golite062009 |
| DNA binding | 0.828609700556836 | bayes_pls_golite062009 |
| nuclease activity | 0.69721312877891 | bayes_pls_golite062009 |
| carbohydrate kinase activity | 0.51810239718467 | bayes_pls_golite062009 |
| tRNA-specific ribonuclease activity | 0.383567539949931 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.0287026367466632 | bayes_pls_golite062009 |
|
Region A: Residues: [331-412] |
1 11 21 31 41 51
| | | | | |
1 SSETPVANEE PSKEESAGAP MDTSDWLPHD EDSQELPMRS EASPSKAGLK GKQSRGKYKA 60
61 NKKTPPRKQN HSDSEEEAKR YI
|
| Detection Method: | |
| Confidence: | 10.69897 |
| Match: | 1sroA |
| Description: | S1 RNA BINDING DOMAIN, NMR, 20 STRUCTURES |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ribonuclease activity | 7.42330864261751 | bayes_pls_golite062009 |
| exoribonuclease activity | 6.76241588209982 | bayes_pls_golite062009 |
| exoribonuclease activity, producing 5'-phosphomonoesters | 6.73428326869965 | bayes_pls_golite062009 |
| 3'-5'-exoribonuclease activity | 5.13367897180134 | bayes_pls_golite062009 |
| 3'-5' exonuclease activity | 3.51306349336452 | bayes_pls_golite062009 |
| nucleic acid binding | 3.194200758646 | bayes_pls_golite062009 |
| exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | 3.07263153665399 | bayes_pls_golite062009 |
| hydrolase activity, acting on ester bonds | 2.73968547121328 | bayes_pls_golite062009 |
| DNA binding | 2.71213098011194 | bayes_pls_golite062009 |
| exonuclease activity | 2.66053639652924 | bayes_pls_golite062009 |
| RNA binding | 2.41160981373213 | bayes_pls_golite062009 |
| binding | 2.24181355929217 | bayes_pls_golite062009 |
| structural constituent of ribosome | 2.02605441840546 | bayes_pls_golite062009 |
| structure-specific DNA binding | 1.81524862921454 | bayes_pls_golite062009 |
| structural molecule activity | 1.81283970647925 | bayes_pls_golite062009 |
| single-stranded DNA binding | 1.62996999055328 | bayes_pls_golite062009 |
| 1.5765009871268 | bayes_pls_golite062009 | |
| aminoacyl-tRNA ligase activity | 1.35850109411274 | bayes_pls_golite062009 |
| ligase activity, forming aminoacyl-tRNA and related compounds | 1.35845277283398 | bayes_pls_golite062009 |
| ligase activity, forming carbon-oxygen bonds | 1.35845277283398 | bayes_pls_golite062009 |
| exoribonuclease II activity | 1.18248519339188 | bayes_pls_golite062009 |
| transcription regulator activity | 0.996884322431837 | bayes_pls_golite062009 |
| hydrolase activity | 0.724860465280978 | bayes_pls_golite062009 |
| nuclease activity | 0.57381531077345 | bayes_pls_golite062009 |
| mRNA binding | 0.4162128308402 | bayes_pls_golite062009 |
| ligase activity | 0.346041081217685 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.32084431704638 | bayes_pls_golite062009 |
| transcription factor activity | 0.298729064067577 | bayes_pls_golite062009 |
| translation regulator activity | 0.22908707234671 | bayes_pls_golite062009 |
| translation factor activity, nucleic acid binding | 0.179682348023561 | bayes_pls_golite062009 |
| aspartate-tRNA ligase activity | 0.151650064901878 | bayes_pls_golite062009 |
| translation initiation factor activity | 0.11625379846973 | bayes_pls_golite062009 |
| RNA polymerase activity | 0.0740938021136293 | bayes_pls_golite062009 |
| DNA-directed RNA polymerase activity | 0.0740938021136293 | bayes_pls_golite062009 |
