| Protein: | gi|190407341 |
| Organism: | Saccharomyces cerevisiae RM11-1a |
| Length: | 293 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|190407341.
| Description | E-value | Query Range |
Subject Range |
|
|
1.0E-95 | [1..293] | [1..293] |
|
|
1.0E-42 | [2..202] | [163..377] |
|
|
4.0E-42 | [28..211] | [25..217] |
|
|
2.0E-40 | [28..188] | [66..222] |
|
Region A: Residues: [1-209] |
1 11 21 31 41 51
| | | | | |
1 MESTSGERSE NIHEDQGIPK VILPADFNKC SRTDLVVLIS RMLVSLIAIN ENSATKKSDD 60
61 QITLTRYHSK IPPNISIFNY FIRLTKFSSL EHCVLMTSLY YIDLLQTVYP DFTLNSLTAH 120
121 RFLLTATTVA TKGLCDSFST NAHYAKVGGV RCHELNILEN DFLKRVNYRI IPRDHNITLC 180
181 SIEQKQKKFV IDKNALGSLD LDSYSYVNR
|
| Detection Method: |  |
| Confidence: | 32.522879 |
| Match: | 1vin__ |
| Description: | Cyclin A |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| cyclin-dependent protein kinase regulator activity | 6.12919068656167 | bayes_pls_golite062009 |
| cyclin-dependent protein kinase activity | 3.81462270101479 | bayes_pls_golite062009 |
| protein kinase regulator activity | 2.90083336559452 | bayes_pls_golite062009 |
| kinase regulator activity | 2.84789294954357 | bayes_pls_golite062009 |
| transcription regulator activity | 2.795846725429 | bayes_pls_golite062009 |
| binding | 2.4204867358489 | bayes_pls_golite062009 |
| nucleic acid binding | 2.04886889839181 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 2.00665312545368 | bayes_pls_golite062009 |
| DNA binding | 1.94297811210385 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 1.86347643875964 | bayes_pls_golite062009 |
| enzyme regulator activity | 1.65951279073909 | bayes_pls_golite062009 |
| protein binding | 1.47106731485576 | bayes_pls_golite062009 |
| transcription repressor activity | 1.42956126861466 | bayes_pls_golite062009 |
| transcription factor activity | 1.21921365719206 | bayes_pls_golite062009 |
| protein kinase activity | 0.957590284872001 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.806564872314381 | bayes_pls_golite062009 |
| kinase activity | 0.79567569649664 | bayes_pls_golite062009 |
| transcription factor binding | 0.749278791251235 | bayes_pls_golite062009 |
| protein serine/threonine kinase activity | 0.567809158275482 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 0.561985718866596 | bayes_pls_golite062009 |
| kinase binding | 0.451409627821468 | bayes_pls_golite062009 |
| transcription activator activity | 0.0696060248241566 | bayes_pls_golite062009 |
|
Region A: Residues: [210-293] |
1 11 21 31 41 51
| | | | | |
1 PKSGYNVLDK YYRRIVQLVG SFNASPDKSR KVDYVLPPNI DIVSESGSQT TQLKGSSSPN 60
61 SHSSQKRYSE AKDAHIYNKR SKPD
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.311 | 0.067 | regulation of phosphate metabolic process | d.93.1 | SH2 domain |
| View | Download | 0.273 | 0.003 | regulation of phosphate metabolic process | a.118.14 | FliG |
| View | Download | 0.426 | 0.003 | regulation of phosphate metabolic process | a.150.1 | Anti-sigma factor AsiA |
| View | Download | 0.260 | 0.002 | regulation of phosphate metabolic process | a.24.7 | FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) |
| View | Download | 0.297 | N/A | N/A | d.237.1 | Hypothetical protein YjiA, C-terminal domain |
| View | Download | 0.253 | N/A | N/A | a.145.1 | Flagellar transcriptional activator FlhD |
| View | Download | 0.237 | N/A | N/A | a.60.11 | Hypothetical protein YjbJ |
| View | Download | 0.235 | N/A | N/A | a.47.2 | t-snare proteins |
| View | Download | 0.222 | N/A | N/A | d.24.1 | Pili subunits |
| View | Download | 0.210 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
