| Protein: | gi|208967188 |
| Organism: | synthetic construct |
| Length: | 404 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|208967188.
| Description | E-value | Query Range |
Subject Range |
|
|
9.0E-71 | [1..404] | [1..402] |
|
|
1.0E-69 | [1..404] | [1..382] |
|
|
1.0E-69 | [1..404] | [1..382] |
|
|
4.0E-69 | [1..404] | [1..401] |
|
|
4.0E-69 | [2..404] | [1..400] |
|
|
6.0E-69 | [1..404] | [1..401] |
|
|
4.0E-64 | [4..399] | [62..472] |
|
Region A: Residues: [1-86] |
1 11 21 31 41 51
| | | | | |
1 MSHIQIPPGL TELLQGYTVE VLRQQPPDLV EFAVEYFTRL REARAPASVL PAATPRQSLG 60
61 HPPPEPGPDR VADAKGDSES EEDEDL
|
| Detection Method: |  |
| Confidence: | 23.045757 |
| Match: | 1o7fA |
| Description: | Regulatory domain of epac2, domain 2; Regulatory domain of Epac2, domains 1 and 3 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [87-404] |
1 11 21 31 41 51
| | | | | |
1 EVPVPSRFNR RVSVCAETYN PDEEEEDTDP RVIHPKTDEQ RCRLQEACKD ILLFKNLDQE 60
61 QLSQVLDAMF ERIVKADEHV IDQGDDGDNF YVIERGTYDI LVTKDNQTRS VGQYDNRGSF 120
121 GELALMYNTP RAATIVATSE GSLWGLDRVT FRRIIVKNNA KKRKMFESFI ESVPLLKSLE 180
181 VSERMKIVDV IGEKIYKDGE RIITQGEKAD SFYIIESGEV SILIRSRTKS NKDGGNQEVE 240
241 IARCHKGQYF GELALVTNKP RAASAYAVGD VKCLVMDVQA FERLLGPCMD IMKRNISHYE 300
301 EQLVKMFGSS VDLGNLGQ
|
| Detection Method: | |
| Confidence: | 48.39794 |
| Match: | 1cx4A |
| Description: | Regulatory subunit of Protein kinase A |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| gated channel activity | 3.75615867846417 | bayes_pls_golite062009 |
| ligand-gated ion channel activity | 3.71111882888041 | bayes_pls_golite062009 |
| ligand-gated channel activity | 3.71111882888041 | bayes_pls_golite062009 |
| cation channel activity | 3.61025292543387 | bayes_pls_golite062009 |
| ion channel activity | 3.49583875363169 | bayes_pls_golite062009 |
| substrate-specific channel activity | 2.99565487349638 | bayes_pls_golite062009 |
| transporter activity | 2.8998330876169 | bayes_pls_golite062009 |
| transmembrane transporter activity | 2.85192191539872 | bayes_pls_golite062009 |
| cAMP-dependent protein kinase regulator activity | 2.78017841119787 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 2.66890994787635 | bayes_pls_golite062009 |
| passive transmembrane transporter activity | 2.66781824266082 | bayes_pls_golite062009 |
| channel activity | 2.66781824266082 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 2.64973131242976 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 2.62037413430064 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 2.28218867890883 | bayes_pls_golite062009 |
| metal ion transmembrane transporter activity | 2.24699267672716 | bayes_pls_golite062009 |
| transcription regulator activity | 1.97137082688083 | bayes_pls_golite062009 |
| binding | 1.80151718402565 | bayes_pls_golite062009 |
| intracellular ligand-gated ion channel activity | 1.68618484766279 | bayes_pls_golite062009 |
| nucleic acid binding | 1.62633054482127 | bayes_pls_golite062009 |
| DNA binding | 1.54942974151543 | bayes_pls_golite062009 |
| enzyme regulator activity | 1.40720858109605 | bayes_pls_golite062009 |
| molecular transducer activity | 1.29733029674587 | bayes_pls_golite062009 |
| signal transducer activity | 1.29733029674587 | bayes_pls_golite062009 |
| cyclic nucleotide-gated ion channel activity | 1.26984296847489 | bayes_pls_golite062009 |
| intracellular cyclic nucleotide activated cation channel activity | 1.26984296847489 | bayes_pls_golite062009 |
| transcription factor activity | 1.14697837766975 | bayes_pls_golite062009 |
| kinase regulator activity | 0.944734749939467 | bayes_pls_golite062009 |
| GTPase regulator activity | 0.930640481652164 | bayes_pls_golite062009 |
| protein kinase regulator activity | 0.921648634540942 | bayes_pls_golite062009 |
| nucleoside-triphosphatase regulator activity | 0.910527807644534 | bayes_pls_golite062009 |
| guanyl-nucleotide exchange factor activity | 0.848189810874263 | bayes_pls_golite062009 |
| protein binding | 0.81302068072988 | bayes_pls_golite062009 |
| nucleotide binding | 0.274529576258456 | bayes_pls_golite062009 |
| voltage-gated ion channel activity | 0.26553997342843 | bayes_pls_golite062009 |
| voltage-gated channel activity | 0.26063388960068 | bayes_pls_golite062009 |
| ribonucleotide binding | 0.0296966221249605 | bayes_pls_golite062009 |
| purine ribonucleotide binding | 0.0295376254112757 | bayes_pls_golite062009 |
| purine nucleotide binding | 0.025744194913981 | bayes_pls_golite062009 |
