| Protein: | CYP59_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 506 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CYP59_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
272.0 | [0..1] | [440..1] |
|
Region A: Residues: [1-203] |
1 11 21 31 41 51
| | | | | |
1 MSVLIVTSLG DIVIDLHSDK CPLTCKNFLK LCKIKYYNGC LFHTVQKDFT AQTGDPTGTG 60
61 AGGDSIYKFL YGEQARFYKD EIHLDLKHSK TGTVAMASGG ENLNASQFYF TLRDDLDYLD 120
121 GKHTVFGQIA EGFDTLTRIN EAYVDPKNRP YKNIRIKHTH ILDDPFDDPP QLAEMMPDAS 180
181 PEGKPKEEVK DDVRLEDDWV PMD
|
| Detection Method: |  |
| Confidence: | 54.09691 |
| Match: | 1xyhA |
| Description: | Crystal Structure of Recombinant Human Cyclophilin J |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| peptidyl-prolyl cis-trans isomerase activity | 3.73853378771688 | bayes_pls_golite062009 |
| cis-trans isomerase activity | 3.66963215732405 | bayes_pls_golite062009 |
| RNA binding | 2.94609837984526 | bayes_pls_golite062009 |
| isomerase activity | 1.96529188741504 | bayes_pls_golite062009 |
| binding | 1.46018233647024 | bayes_pls_golite062009 |
| mRNA binding | 1.45537055700871 | bayes_pls_golite062009 |
| unfolded protein binding | 1.38124355054041 | bayes_pls_golite062009 |
| nucleic acid binding | 0.939772862764466 | bayes_pls_golite062009 |
| catalytic activity | 0.748655649755714 | bayes_pls_golite062009 |
| drug binding | 0.36339132904137 | bayes_pls_golite062009 |
| protein binding | 0.130251391659493 | bayes_pls_golite062009 |
|
Region A: Residues: [204-412] |
1 11 21 31 41 51
| | | | | |
1 EELGAQELEE VIREKAAHSS AVVLESIGDI PEAEVKPPDN VLFVCKLNPV TEDEDLHTIF 60
61 SRFGTVVSAD VIRDFKTGDS LCYAFIEFEN KESCEQAYFK MDNALIDDRR IHVDFSQSVS 120
121 KLWSQFRQKD SQKGKGNGCF KCGSTDHIAK DCVGGPSSKF IVKDQNRQHG GGEGYEMVFE 180
181 GDVHETPKHN SHERERSEKI QRRSPHGNG
|
| Detection Method: | |
| Confidence: | 7.154902 |
| Match: | 1l3kA |
| Description: | Nuclear ribonucleoprotein A1 (RNP A1, UP1) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| RNA binding | 6.73097473547076 | bayes_pls_golite062009 |
| 6.62953239642182 | bayes_pls_golite062009 | |
| mRNA binding | 5.29759606920196 | bayes_pls_golite062009 |
| nucleic acid binding | 3.81920018903278 | bayes_pls_golite062009 |
| snRNA binding | 3.73900239153067 | bayes_pls_golite062009 |
| binding | 3.44552682116509 | bayes_pls_golite062009 |
| poly-pyrimidine tract binding | 3.11990160533699 | bayes_pls_golite062009 |
| single-stranded RNA binding | 2.93798024346416 | bayes_pls_golite062009 |
| U1 snRNA binding | 2.70790653818369 | bayes_pls_golite062009 |
| structural molecule activity | 1.56454315220334 | bayes_pls_golite062009 |
| transcription regulator activity | 1.07788694919471 | bayes_pls_golite062009 |
| protein binding | 1.02232785292059 | bayes_pls_golite062009 |
| DNA binding | 0.978604858165557 | bayes_pls_golite062009 |
| mRNA 3'-UTR binding | 0.591700155096213 | bayes_pls_golite062009 |
| transporter activity | 0.417047632648771 | bayes_pls_golite062009 |
| transmembrane transporter activity | 0.288804044686487 | bayes_pls_golite062009 |
| transcription factor activity | 0.234742017105535 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 0.0532703224747206 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.00171911393626201 | bayes_pls_golite062009 |
|
Region A: Residues: [413-506] |
1 11 21 31 41 51
| | | | | |
1 EGKRQHRDER DDGRRQHDRE DARELERKHR ERKERESRED EDRRRRRRRE ESRDKESRRE 60
61 RDEDDHRSHR DYKERRRERD DRHGREARHE RRDR
|
| Detection Method: | |
| Confidence: | 1.03 |
| Match: | 2d57A |
| Description: | Double layered 2D crystal structure of AQUAPORIN-4 (AQP4M23) at 3.2 a resolution by electron crystallography |
Matching Structure (courtesy of the PDB): |
|
